Detailed information on CNT30590300


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30532230Musa acuminataEucalyptus grandis3413.3394.1268forward
CNT3046844Musa acuminataPrunus dulcis35.51492.9671forward
CNT3011623Musa acuminataZea mays35.517.5792.9671reverse complement
CNT3067939Musa acuminataLeersia perrieri3423.6192.6568reverse complement
CNT30348934Musa acuminataEragrostis tef353.9592.8670reverse complement
CNT30363122Musa acuminataSorghum bicolor35.518.1691.5571reverse complement
CNT3057178Musa acuminataAmborella trichopoda3411.7994.1268reverse complement
CNT30579009Musa acuminataEchinochloa crusgalli3515.2292.8670forward
CNT30551345Musa acuminataOryza brachyantha28.510.1891.2357forward
CNT3063959Musa acuminataSelaginella moellendorffii34.510.8889.8669forward
CNT3050068Musa acuminataCucumis sativus3416.591.1868reverse complement

Expression of CNT30590300

Peptides detected in this lncRNA

>peptide 1 (32 aa)
VEEETHEEAQEETPKDEAEVKVGMYGCTASQF*

Sequence

>CNT30590300
AGTGGAAGAAGAAACGCATGAGGAGGCTCAAGAGGAAACGCCGAAAGATGAGGCAGAGGTCAAAGTAGGCATGTATGGCTGCACAGCATCTCAGTTTTGA
AGTTTCAGGAACTCAATACTTTGTTTAGGAAGTTGATACTTGGTGATTTACATTCAACAGTGGTGTTTTTGTTCGACACAGTATCTGAAATTAATCATGC