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Detailed information on CNT3059026


BLAST search results

BLAST vs Swiss-Prot:
sp|Q70XX5|RR8_AMBTC, E-value = 2e-87

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641762Amborella trichopodaNymphaea colorata53.822.2486.27772forward
CNT30541469Amborella trichopodaBrassica napus28.0826.3480.4403forward
CNT30511668Amborella trichopodaSolanum lycopersicum14.9171.189.25214forward
CNT30556066Amborella trichopodaOryza glaberrima8.1520.6791.45117forward
CNT30134355Amborella trichopodaLolium perenne22.9313.0781.16329forward
CNT30202977Amborella trichopodaHelianthus annuus9.4125.5788.15135forward
CNT30351320Amborella trichopodaEragrostis tef6.6939.3483.3396forward
CNT30434619Amborella trichopodaPapaver somniferum44.1194.4886.73633forward
CNT30576477Amborella trichopodaOryza barthii10.0331.3785.42144forward

Expression of CNT3059026

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MSKIDPLFVGHPVKSSFINIKITPVSVYVSDWNKLL*

>peptide 2 (39 aa)
MSRIGTNYYNSSSPTNQSTFFTNLTNRGSYFHMCRSLLN*

>peptide 3 (40 aa)
MFSVILVDAIRTILFLSMSAFLIQVIILAIVSLPMTNYNY*

Sequence

>CNT3059026
ACATCTGTAACAGTCACAATGGTATTATTGAAACTCGCTTGAACATGAATAACTCCTTTGGGTATTCTACGTCCATTCTTACGTGAACCAATACGTCCAT
TTCTACGCGAACCAATTCTTGGTATAGGTTTTTTCATATTTTATTATCTCATAAATATGAGTCAAAGATATACGGATATATCCATTTCATGTCAAAAATA
GATCCTTTATTTGTTGGGCACCCTGTGAAGTCCTCTTTTATAAATATAAAAATTACCCCTGTCTCTGTTTATGTCTCGGATTGGAACAAATTACTATAAT
TCGTCCTCGCCTACGAATCAGTCGACATTTTTCACAAATCTTACGAACAGAGGCTCTTATTTTCATATGTGTCGCTCCTTACTTAATTGAATTCTGAATT
TCTTCCTTGGAAGAAAAAAAGAAGTTTCTTGAACTTTTGAGCCTCGATATCCTTATGGAAGAAATGAAAGGAATTTTTAAGAAGCCGTCTAATCATTCGA
ATCTTTGTTGCGAAGCCTATAAATAATACGTCCCCTGGTTGAATCATAACGACTTACTTCAATTTTCACTCTATCGCCTGGTAATATCCGTATAAAACTA
CGTCGGATCCTTCCTGAAACATAACCTAGAACCAGGTCTCCATTATCTAAGCGAACTTGGAACATGCCATTGGGAAGTGATTCAGTAATTAAACCTTCAT
GAATTAATTTTTGTTCTTTCATTCCAGGTAACCCCCTTCCTTGAAGTATCAACTAATAGAGGATAAGCGGTATTAGCCAACTTGTCTCTCCTCTCTTTTT
CATAAAATAAATAGGAAGTTACGGATAAAATTCGTATACCAGAAGGATCACCATATATAACATAAAATCTCTCCTCCAATTCCTTCTCGTCGAGCCTCTC
GATCTGTCATTATACCTCGAGAAGTAGAAAGAATTACAACCCCCATTCCACCTGAAATCCTAGGAATTCGTTGATAGTTGGAATAGATTCGTAGACCGGA
TCTGCTTATACGTTTTAAAGTCTTTCTATATGTCCCTTTCCTATTCCTTTTATGTCGCAAGGTTAAAACCAGGAAATTTTTGTTGTTTTCCCGATGTTTC
CTAACGTTTTCAATAAAACCTTCTTGTAGAATTATTTTAACAATGTTTTCGGTTATATTGGTAGATGCTATTCGAACCATTCTTTTTTTATCCATGTCGG
CATTTCTTATACAAGTTATTATATTGGCAATAGTGTCCCTACCCATGACGAACTATAATTATTAGTATCTCCTGACTTTGATATGATCAACATGTTCCTT
ATTTCTTTATTTTTTATGAAATGGAAATGAAAGGTATATGCGTGAGACACAATCCACTAATTGATTGATCCGTTTTAGATACTATACCATTGTCTCATCT
ACTATCATTAGAATACCTCGGGAGCTAATGATACT