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Detailed information on CNT30590151


BLAST search results

BLAST vs Swiss-Prot:
sp|P0DO53|PIP12_MUSAC, E-value = 5e-62

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30297784Musa acuminataTriticum aestivum32.1918.2685.62160forward

Expression of CNT30590151

Peptides detected in this lncRNA

>peptide 1 (35 aa)
TTLGVTRGHNIRSTSIVLIEPLLKPFHHARTAYGT*

>peptide 2 (31 aa)
MPPKAQAIPWMPTVEHLVLDLTTPMTVRMLM*

Sequence

>CNT30590151
CACCACCCTTGGTGTAACCAGGGGCCACAACATTCGCTCCACCTCCATTGTTCTCATAGAGCCCCTTCTTAAACCCTTTCACCACGCCCGCACCGCATAT
GGCACCTAGACACTGCATCACCATGTAGAACAGAGCCCTGGTCAGGGACAGCTTCCTGGCCAGGAGCAGCCCAAAGATCATGCCACCAAAGGCCCAGGCA
ATCCCCTGGATGCCCACGGTGGAGCACTTGGTGTTGGACTTGACCACACCCATGACGGTGAGGATGCTGATGTAGAGGAAGAGGAAGCTGAGCTCCGCTG
GCTCAAACAGTGGAGCTGGTGGTGGCTCCTGGTAGTCCCTGTCCTGACTCTGGGCAGCTGTCCCTATTGCCTGCCTCTCCGAGAACTTGTTTGCTCCCAC
CCTCACATCCTCCTCTCTCCCCTCCATCTTACCCCGAGGACACTCTTCTCCGGACTCTAGAACTATATGATGAGCACAGGAAAGAAACGTTGTGTGG