« Back to Musa acuminata search


Detailed information on CNT30589825


BLAST search results

BLAST vs Swiss-Prot:
sp|P27518|CB21_GOSHI, E-value = 4e-75

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30297772Musa acuminataTriticum aestivum51.1528.1989.89267forward
CNT30440203Musa acuminataAegilops tauschii57.0942.6388.93298forward
CNT30370984Musa acuminataOryza glumipatula66.0943.4587.54345forward

Expression of CNT30589825

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MMARLQPPFMSRYTHHFRGRRPTTTTSMHAGRQREMITCRGRSWWRRPRRCWRRGRRGGRGRS*

Sequence

>CNT30589825
CCTTCGACACTTGCACTAAGTCGACCATTAACTAATAATATCAATATTACAGTACAACACAACACATGATGGCTCGATTGCAGCCTCCCTTCATGTCCCG
TTACACCCACCATTTTAGAGGAAGACGACCGACAACGACGACGTCAATGCACGCGGGAAGGCAGCGGGAGATGATCACTTGCCGGGGACGAAGTTGGTGG
CGTAGGCCCAGGCGTTGTTGGCGACGGGGTCGGCGAGGTGGTCGCGGCCGTTCTTGATCTCCTTCACCTTGAGCTCCGCGAACGCGTCGGGGTCGTCGGC
CAGGCCCAGGGGGTCGAAGGCGCCGCCGGGGTAGATGGCGTCGAGGCCCTCACCCAGCGGGCCGCCGCCGACGCGGTAGCCCTCCACGAAGCCCATCAGC
ACCACCTGGCAGGCCCAGATGGCGAGGATGCTCTGCGCGTGGATCAGGTTGGGGTTGCCCAGGTAGTCGAGGCCGCCCTCCGAGAAGATCTGCGCCCCGG
CCTTGAACCACACCGCCTCCCC