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Detailed information on CNT30589749


BLAST search results

BLAST vs Swiss-Prot:
sp|P84977|GRP3_POPEU, E-value = 6e-07

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30116148Musa acuminataOryza nivara11.8836.4485.3782forward

Expression of CNT30589749

Peptides detected in this lncRNA

>peptide 1 (65 aa)
MFRPSRVWPFIPLMASLIDCSSRKPPWKGSERNPEQERTAEEGEVTPTHLCRSTRNPRAPPKVHI*

Sequence

>CNT30589749
CTGCCAAACCACAACCATCAGTCTACTAATACTGCAAGACCCAAAATGACGCCAGACAACAGACAAGTCCAAACTTAAAGATAACCAAAGCAGCAGATAA
CTACGAAGCCCAGCCCTCCGATCGCGGCAAGCGAACGACCGCCTTAGCTCCTCCAGTACCCATCCGACGATCCACCGCCGTACCCGCGGTCGCGGCCGTA
ACCACCGCCTCCGTCACGGCGACCGCCGCCGCCGCCGTACCCGCCGCCGCCGCCGCTGCGAAAACCTCCTCCGCCGCCGCCGTACCCACCGCCTCCGCTG
CGAAAGCCTCCGCCGCCGCCGTACCCACCACCTCCGCTGCGGAATCCACCATCGCTCCGGCGGTTCTGGGCCTCGTTTACTGTGATGTTCCGGCCGTCAA
GGGTCTGGCCGTTCATCCCCTTGATGGCGTCCCTCATCGACTGCTCGTCGCGGAAGCCGCCATGGAAAGGATCGGAACGGAACCCTGAACAGGAAAGGAC
GGCGGAAGAGGGGGAGGTAACACCAACCCACCTCTGTAGGAGCACAAGAAACCCCAGGGCACCCCCAAAAGTACATATATAGAACGAGCGCTGGCGGATC
TGGCGGTAACCTCACCGCCCTTTAGGTCATTTTACCCTTCCGCCTTCCTTATCGCTCCTGTGGGGGTGCGGCGGTCACCCTCCGGGCCTC