Detailed information on CNT30589697


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7XJ39|NLT2A_ORYSJ, E-value = 2e-33

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30550009Musa acuminataIpomoea triloba21.1511.3487.8866forward
CNT30708149Musa acuminataGlycine max25.646.148580forward
CNT30104115Musa acuminataOryza rufipogon20.1920.9387.363forward

Expression of CNT30589697

Peptides detected in this lncRNA

>peptide 1 (80 aa)
PVHLGAVGGGADGVADADATFARDAGNSTGLGPRETGHGGLDAGARGLAVRRGLRGAVEALHPAAASGGQRPLAGGVGDA*

>peptide 2 (61 aa)
MLTPHLPGMPAIAPAWAPERRDTVDLMQVHAVLRSAVVFAALLRLFTPLQQAVDSGPLPVA*

Sequence

>CNT30589697
TCCCCGTACACCTGGGAGCAGTCGGTGGAGGCGCTGATGGGGTAGCCGATGCTGACGCCACATTTGCCCGGGATGCCGGCAATAGCACCGGCTTGGGCCC
CCGAGAGACGGGACACGGTGGACTTGATGCAGGTGCACGCGGTCTTGCGGTCCGCCGTGGTCTTCGCGGCGCTGTTGAGGCTCTTCACCCCGCTGCAGCA
AGCGGTGGACAGCGGCCCCTTGCCGGTGGCGTAGGAGATGCATGAGCTCAGGGCGGACGTGACCTGCCCGCACGTGATGGCTAGGGTCACATGTGGTGCG
GTGACGAGGAGG