Detailed information on CNT30589662


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FKG2|EF107_ARATH, E-value = 1e-18

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30565028Musa acuminataActinidia chinensis21.5919.5284.21114forward
CNT3087835Musa acuminataVigna radiata24.815.6282.44131forward
CNT30254792Musa acuminataAvena sativa19.5123.0484.47103forward
CNT30112207Musa acuminataFicus carica21.0212.9882.88111forward

Expression of CNT30589662

Peptides detected in this lncRNA

>peptide 1 (91 aa)
MAASVSFFLLLGEAFSEGDREEEEEEEEEDSDEEGEAGSGADRFDGESGVHRGVERPQPYPGPFLGRVAYLRRELPPGPPPHSPVMPLLRR*

>peptide 2 (53 aa)
MKKVKQAPAQTASTARAASTAVSNVPSHTLAPFLAGSRISAANFPQGRRLTPR*

Sequence

>CNT30589662
GCCTGCGACTGAACTGATTCCGACACCGAGCCTTCTGTGAAGGAGACCGAGGGCGGGAGAGAAGACGATGTGATGGCCGCCTCCGTCTCTTTCTTCCTCC
TCTTGGGCGAGGCCTTCTCTGAAGGAGACCGAGAGGAGGAGGAGGAGGAGGAGGAGGAGGATAGTGATGAAGAAGGTGAAGCAGGCTCCGGCGCAGACCG
CTTCGACGGCGAGAGCGGCGTCCACCGCGGTGTCGAACGTCCCCAGCCATACCCTGGCCCCTTTCTTGGCCGGGTCGCGTATCTCCGCCGCGAACTTCCC
CCAGGGCCGCCGCCTCACTCCCCGGTAATGCCTCTCCTCCGCCGGTAAGGGATCGACAGACGAGGGCGTCCATCCGTCGTTCCGCTGATCTTCGAATCTG
GAGCTCCGGTGGCGGGTCGGCGCGCGAGGTAAGTTGGCCGCGGAAGAGCTGAGCTCGCAGGGGTGAGGCTCGGGGTCGTCGAGGAGGTACCGGCGGACGT
ACTCGAGGAGGGCAACGTCGGTCTCGGG