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Detailed information on CNT30589607


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692141Musa acuminataOryza sativa81.3847.5486.83319forward
CNT30317088Musa acuminataCorylus avellana46.6825.0386.34183forward
CNT30703372Musa acuminataQuercus lobata42.638.8482.63167forward
CNT30616476Musa acuminataSesamum indicum48.2138.186.77189forward
CNT30552977Musa acuminataOryza glaberrima60.7135.5290.76238forward
CNT30132965Musa acuminataLolium perenne61.7352.7287.19242forward
CNT301476Musa acuminataZea mays22.1926.5294.2587forward
CNT30231426Musa acuminataAnanas comosus79.8539.8784.35313forward
CNT30345256Musa acuminataEragrostis tef62.547.6789.39245forward
CNT30361694Musa acuminataSorghum bicolor2544.3492.8698forward
CNT30596031Musa acuminataOryza meridionalis81.3887.1686.52319forward
CNT30153443Musa acuminataPrunus persica30.8753.0782.64121forward
CNT30573153Musa acuminataVitis vinifera34.1821.2484.33134forward
CNT30101081Musa acuminataOryza rufipogon81.3826.1986.83319forward
CNT30116289Musa acuminataOryza nivara81.3840.7986.83319forward
CNT30112524Musa acuminataFicus carica60.9714.0183.26239forward

Expression of CNT30589607

Peptides detected in this lncRNA

>peptide 1 (29 aa)
HLHSTRVAMRSLFRLRPARSPTVVSWCSS*

Sequence

>CNT30589607
GTCACCTCCACTCGACTCGCGTCGCGATGAGGTCATTATTTCGTCTGCGGCCTGCGCGCTCACCGACCGTCGTCAGTTGGTGTAGTTCTTGACGGCGGCG
TGGGGCTCGGCGGCCTTGGCGGCGGGGGTGGGTTCGACGGTGGGAGAAGGTAGAAGGTGTAGAAGATCTTGAAGGGGAAGACGATCTGCTGCAGCTTGAC
CTGGCCGTAGACGCCCTCGAAGATGCCGGAGCCGCCGGTCACGGCCAGGTAAGAGTCCTCGTAGGTCAGGTACGCCCCCTGCACCGAGACGTGGCCGTAG
TCGCCGAAGTAGAAGCTGTAGATGGCTTCGTAGCGGTCGCCGCCCCTCTCCGGAACGTGCTGGATCAGCACGCAGATCCCCGCCGTGATGCC