Detailed information on CNT30589596


BLAST search results

BLAST vs Swiss-Prot:
sp|P15194|CB2B_PINSY, E-value = 5e-62

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30225034Musa acuminataHordeum vulgare50.7837.9487.72228forward
CNT30370980Musa acuminataOryza glumipatula62.1438.0188.17279forward
CNT30603508Musa acuminataOryza punctata50.5629.0788.55227forward

Expression of CNT30589596

Peptides detected in this lncRNA

>peptide 1 (33 aa)
PHNKSHSTNQQYNYFASSTAISFNMTEVATCYG*

Sequence

>CNT30589596
GCCCGCACAATAAATCCCATAGTACAAATCAACAGTACAACTATTTTGCATCGTCAACAGCAATCTCGTTCAATATGACTGAGGTTGCTACTTGCTACGG
ATGAAGTGTGCCAGGCAGCGGCAGTGGGAGAGGCTGCTCACTTGCCGGGGACGAAGTTGGTGGCGTAGGCCCAAGCATTGTTGTTGACAGGGTCGGCGAG
GCCGAGGGGGTCGAAGCTGCCGCCCGGGTAGAGCGGGTCGGTCACCTCTCCCAGCGGCCCGCCAGCGATGCGGTAGCCCTCCACGGCGCCCATCAGGATC
ACCTGGCACGCCCAGATGGCCAGAATGCTCTGGGCGTGGATCAAGCTGGGGTTGCCAAGGTAGTCCAGCCCGCCCTCGCTAAAGATCTGCGCGCCAGCCT
TGAACCACACCGCCTCCCCGAACTTGACCCCGTTCCGGGATAGCAGCTC