Detailed information on CNT30589591


BLAST search results

BLAST vs Swiss-Prot:
sp|P27518|CB21_GOSHI, E-value = 3e-87

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522398Musa acuminataSetaria italica70.9239.4589400forward
CNT30664567Musa acuminataTriticum dicoccoides54.7937.8292.88309forward
CNT30684416Musa acuminataTriticum urartu59.7539.2390.5337forward
CNT30370987Musa acuminataOryza glumipatula70.7457.7486.97399forward
CNT30116676Musa acuminataOryza nivara69.1536.9391.54390forward

Expression of CNT30589591

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MGPLPVTMACTKKPNMENMARRPFLISFTLSSANASGSSARPRGSKAPPG*

>peptide 2 (77 aa)
MMARLQPPFMSRYTHHFRGRRPTTTTSMHAGRQREMITCRGRSWWRRPRRCSRWGPCRSRWPARRSRTWRTWQGGRS*

Sequence

>CNT30589591
CCTTCGACACTTGCACTAAGTCGACCATTAACTAATAATATCAATATTACAGTACAACACAACACATGATGGCTCGATTGCAGCCTCCCTTCATGTCCCG
TTACACCCACCATTTTAGAGGAAGACGACCGACAACGACGACGTCAATGCACGCGGGAAGGCAGCGGGAGATGATCACTTGCCGGGGACGAAGTTGGTGG
CGTAGGCCCAGGCGTTGTTCTCGATGGGGCCCTTGCCGGTCACGATGGCCTGCACGAAGAAGCCGAACATGGAGAACATGGCAAGGCGGCCGTTCTTGAT
CTCCTTCACCTTGAGCTCCGCGAACGCGTCGGGGTCGTCGGCCAGGCCCAGGGGGTCGAAGGCGCCGCCGGGGTAGATGGCGTCGAGGCCCTCACCCAGC
GGGCCGCCGCCGACGCGGTAGCCCTCCACGAAGCCCATCAGCACCACCTGGCAGGCCCAGATGGCGAGGATGCTCTGCGCGTGGATCAGGTTGGGGTTGC
CCAGGTAGTCGAGGCCGCCCTCCGAGAAGATCTGCGCCCCGGCCTTGAACCACACCGCCTCCCC