Detailed information on CNT30589396


BLAST search results

BLAST vs Swiss-Prot:
sp|A6MM45|ACCD_BUXMI, E-value = 9e-21

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30539441Musa acuminataBrassica napus32.32.5684125forward
CNT30354656Musa acuminataLactuca sativa31.274.2485.95121forward
CNT3058960Musa acuminataAmborella trichopoda25.324.8189.898forward
CNT30726954Musa acuminataLupinus angustifolius31.274.5684.3121forward

Expression of CNT30589396

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MSNLFRVDLVSLLVETMTPLLEVVEVFACLSSW*

Sequence

>CNT30589396
ATCAAATAGTTCTTATAAACTTTTTCGTACTTATTGTATCATATATCTGATATATCAAGACTGAATCTAGTGCTATACTTTACATTTTTGAACTTGGATT
CAAGGGAAAGAAACCGTGGAGCTGAAATAACTCACCCAGAACACCTTTTAAAAGATTACGTGGTACTATTGGGTCGAATAAACCTTTATGGAATAAATAC
TCAGACACTTGTGAACCTTCAGGATCGAGTGTATGTCCAACCTTTTCAGAGTTGACTTAGTTTCACTATTGGTGGAAACTATGACTCCATTACTTGAAGT
TGTAGAAGTGTTTGCATGCCTATCTTCCTGGTGACGAAAATGCAATAATTCATTACTCACTTGAAGATGTTCTTGAATCTTCAGAAG