Detailed information on CNT30589349


BLAST search results

BLAST vs Swiss-Prot:
sp|P35792|PR12_HORVU, E-value = 1e-27

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30307702Musa acuminataTriticum aestivum25.5312.5485.7184forward
CNT30450505Musa acuminataSaccharum spontaneum24.628.2890.1281forward
CNT30141157Musa acuminataLolium perenne28.889.8985.2695forward

Expression of CNT30589349

Peptides detected in this lncRNA

>peptide 1 (88 aa)
GGVVGAHEVLGRVLGVDGVCRRVVATGAPEDVLAVRPAGVHELAVGRPLVGVVLGVRRDGVVPRHGADADGGAGGVVGAHEVLGRVLG*

Sequence

>CNT30589349
GGGCGGCGTTGTGGGGGCTCACGAAGTCCTGGGGCGAGTTCTGGGCGTTGACGGCGTCTGCCGCCGTGTAGTCGCGACCGGAGCCCCAGAAGATGTTCTC
GCCGTACGGCCCGCCGGAGTGCACGAGCTGGCAGTCGGCCGCCCGCTGGTTGGCGTAGTTCTGGGCGTACGCCGCGACGGTGTTGTCCCACGACACGGGG
CCGACGCCGACGGCGGCGCGGGCGGCGTTGTGGGGGCTCACGAAGTCCTGGGGCGAGTTCTGGGCTAGGGCACTGGTGCAGGCCATGGCAAGAGCCACGG
CGAAGAGCATAGCCAAAGCTGAGTTTGAG