Detailed information on CNT30589276


BLAST search results

BLAST vs Swiss-Prot:
sp|Q5Z6F0|TIP22_ORYSJ, E-value = 1e-29

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30553963Musa acuminataOryza glaberrima51.420.9187.76147forward
CNT30142178Musa acuminataLolium perenne51.422.7287.07147forward
CNT3017683Musa acuminataZea mays21.6812.593.5562forward
CNT30576737Musa acuminataOryza barthii44.4129.288.19127forward

Expression of CNT30589276

Peptides detected in this lncRNA

>peptide 1 (44 aa)
QGLRVTAEVAGGRVTSRRRCTPTLRGRRQSGGRQSRSRGRRSPR*

Sequence

>CNT30589276
CAGGGCTTACGAGTCACTGCGGAAGTGGCTGGTGGTCGTGTAACAAGTAGGCGTAGGTGTACACCAACCCTGCGAGGCCGCCGCCAATCAGGGGGCCGAC
AAAGTAGATCCAGAGGTCGGAGAAGTCCCCGCTAGCGACGGCGGGCCCGAAGGAGCGAGCCGGGTTCATCGACCCGCCGGAGAAGGGGCCGGCGGCGAGG
ATGTTGGCGCCGACGATGAAGCCGATGGCGATCGGGGCGATGGTGATGATGATCTCCATCACCACCCCTTCTCCTGCTCCCACTCC