Detailed information on CNT30589156


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LUM4|RAP22_ARATH, E-value = 4e-23

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30140539Musa acuminataLolium perenne30.5415.2486.8191forward
CNT30229217Musa acuminataAnanas comosus19.1323.8592.9857forward
CNT30338289Musa acuminataEragrostis tef19.1320.6591.2357forward

Expression of CNT30589156

Peptides detected in this lncRNA

>peptide 1 (66 aa)
MGWVVTRGCSSWMGKLSFARAAASAVSNVPSHLRTARLGSRISAAHFPHGRCRTPRYLFSFFSPLLF

>peptide 2 (35 aa)
PSTPAPNVGPFRPLPIAFQAAVPVGESWKTARWVG*

Sequence

>CNT30589156
CCATCAACTCCTGCCCCAAATGTTGGTCCGTTTCGTCCTCTTCCCATTGCATTCCAAGCTGCTGTTCCTGTAGGTGAATCGTGGAAGACAGCGAGATGGG
TTGGGTAGTCACCAGAGGTTGCTCCTCCTGGATGGGGAAATTGAGCTTCGCCCGCGCCGCCGCCTCCGCCGTGTCGAACGTCCCCAGCCACTTACGCACC
GCCCGCCTCGGGTCCCGGATCTCCGCCGCCCACTTTCCCCACGGTCGCTGCCGCACGCCCCGGTACCTGTTCTCCTTCTTCTCCCCCCTCCTCTTCCT