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Detailed information on CNT30589124


BLAST search results

BLAST vs Swiss-Prot:
sp|Q01667|CAB6_ARATH, E-value = 3e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673697Musa acuminataSetaria viridis29.2821.0491.0189forward
CNT30183892Musa acuminataSecale cereale26.6415.3193.8381forward
CNT30304990Musa acuminataTriticum aestivum49.3459.7687.33150forward
CNT30226503Musa acuminataHordeum vulgare25.9914.0892.4179forward
CNT30399846Musa acuminataTriticum turgidum44.0827.1388.81134forward
CNT30442668Musa acuminataAegilops tauschii37.8313.9488.7115forward
CNT30254921Musa acuminataAvena sativa48.3661.5185.71147forward
CNT30669889Musa acuminataTriticum dicoccoides49.3459.0687.33150forward
CNT30142107Musa acuminataLolium perenne29.9310.5992.3191forward
CNT309612Musa acuminataZea mays28.959.3594.3288forward
CNT30344604Musa acuminataEragrostis tef28.959.7290.9188forward
CNT30580015Musa acuminataEchinochloa crusgalli51.6428.1987.9157forward
CNT30497041Musa acuminataDigitaria exilis29.2819.1892.1389forward

Expression of CNT30589124

Peptides detected in this lncRNA

>peptide 1 (55 aa)
GFCRSDRMSSLCLSLSLGLVHGKMDLGMTISPMARFQGTPTAARRSPRRQWRRTR*

>peptide 2 (50 aa)
MAKNSMTRMVGRVPQGTGLPRYVACPPGIAAHSCAFTQLPRPSASGTKIPG

Sequence

>CNT30589124
AGGGATTTTGCAGGAGTGACAGGATGAGCTCTCTCTGTCTCTCTCTCTCTCTCGGTCTCGTTCATGGCAAAATGGATCTGGGGATGACAATTTCTCCAAT
GGCCCGGTTCCAGGGTACGCCGACTGCTGCACGCAGAAGCCCACGAAGGCAATGGCGAAGAACTCGATGACGAGGATGGTGGGGAGAGTGCCCCAGGGGA
CTGGGTTGCCTAGGTACGTCGCCTGCCCGCCGGGGATCGCCGCCCACTCCTGCGCCTTCACCCAGTTGCCCAGGCCCAGTGCTTCCGGCACCAAGATCCC
TGGC