CANTATAdb - search

Detailed information on CNT30588982

BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 2e-146

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-116

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30275114	Musa acuminata	Chenopodium quinoa	72.61	89	84.59	623	forward
CNT30727227	Musa acuminata	Corchorus capsularis	72.61	54.22	84.43	623	forward
CNT30652979	Musa acuminata	Rosa chinensis	72.96	57.17	86.58	626	forward
CNT30327242	Musa acuminata	Asparagus officinalis	72.61	62.61	85.39	623	forward
CNT30603728	Musa acuminata	Oryza punctata	72.61	57.53	85.39	623	forward

Expression of CNT30588982

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MPSLSWILALTLSMVSEDSTSRVMVFPVRVLTKICMPPRRRSTRWRVDSFWML*

>peptide 2 (30 aa)
MQYSSISEHTIQIQDRLVLNFKHKHQTPED*

>peptide 3 (46 aa)
SAFIQTSMVIIIINPQHKVVRFTFYSINYRCNTPAYQNIPSKYRTD*

>peptide 4 (30 aa)
MVFPVRVFTKICIPPLSLSTKWRVDSFWIL*

Sequence

>CNT30588982
TTCTGCATTCATTCAAACTTCCATGGTAATAATAATCATAAATCCTCAACACAAGGTGGTGAGGTTCACCTTTTATTCCATTAATTATAGATGCAATACT
CCAGCATATCAGAACATACCATCCAAATACAGGACCGACTAGTACTAAACTTCAAACATAAACATCAGACACCAGAAGACTAGAGGAGCATCACACTAAT
AGCAGCAAATGCTGGAAGTTCACTGGCCACCGCGGAGACGAAGGACCAGGTGAAGAGTGGATTCCTTCTGGATGTTATAGTCTGCCAGTGTGCGCCCATC
CTCGAGCTGCTTACCCGCAAAGATTAGCCTCTGTTGGTCTGGTGGGATTCCCTCCTTGTCCTGTATCTTTGCCTTCACATTGTCGATAGTGTCCGAGCTC
TCAACCTCCAGAGTGATGGTCTTCCCCGTGAGGGTTTTCACAAAAATTTGCATCCCTCCCCTGAGCCTCAGCACCAAGTGGAGGGTGGACTCCTTCTGGA
TATTGTAGTCGGCCAAGGTGCGGCCATCCTCGAGCTGTTTGCCAGCGAAGATGAGCCTTTGCTGATCCGGGGGAATGCCTTCCTTGTCCTGGATCTTGGC
TTTGACATTGTCAATGGTGTCAGAGGATTCAACCTCAAGGGTGATGGTCTTTCCGGTGAGAGTTTTGACAAAGATTTGCATGCCACCACGGAGGCGGAGT
ACAAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCAAGTTGCTTGCCAGCAAATATCAACCTTTGCTGGTCCGGGG
GTATTCCCTCCTTATCCTGGATCTTGGCTTTGACATTGTCAATGGTGTCAGAGGATTC