Detailed information on CNT30588826


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30664727Musa acuminataTriticum dicoccoides28.376.6991.861forward
CNT30679210Musa acuminataTriticum urartu39.0721.8283.3384forward
CNT30364667Musa acuminataSorghum bicolor27.917.669060forward
CNT30577782Musa acuminataOryza barthii23.724.792.1651forward
CNT30582964Musa acuminataEchinochloa crusgalli43.2614.0183.8793forward

Expression of CNT30588826

Peptides detected in this lncRNA

>peptide 1 (50 aa)
AGVGVGAEAVDEVEPRAGRVVTHFGPEEGLVLAVCGECSAYVAPLQSQGD*

>peptide 2 (70 aa)
RRRCGRGGRRRGRAAGREGSDSLWSRRRARARRLRRMLCLCSPSPVPGGLDGQGLSSWRTNTSSQSTSFSR

Sequence

>CNT30588826
GCCGGCGTCGGTGTGGGCGCGGAGGCCGTCGACGAGGTCGAGCCGCGGGCAGGGAGGGTAGTGACTCACTTTGGTCCCGAAGAAGGGCTCGTGCTCGCCG
TTTGCGGAGAATGCTCTGCTTATGTAGCCCCTCTCCAGTCCCAGGGGGATTAGATGGCCAGGGCTTATCATCTTGGAGGACGAACACATCCTCCCAATCG
ACGTCGTTCAGCCGC