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Detailed information on CNT30588765

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT000988, E-value = 8e-114

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30676994	Musa acuminata	Setaria viridis	56.3	78.76	91.6	393	reverse complement
CNT30524664	Musa acuminata	Setaria italica	43.7	22.28	96.39	305	reverse complement
CNT30639555	Musa acuminata	Nymphaea colorata	85.82	35.07	96.83	599	reverse complement
CNT30536068	Musa acuminata	Eucalyptus grandis	85.67	17.36	94.98	598	forward
CNT30513456	Musa acuminata	Juglans regia	86.39	19	95.02	603	reverse complement
CNT30500477	Musa acuminata	Coffea canephora	85.82	32.89	96.33	599	reverse complement
CNT30269781	Musa acuminata	Chenopodium quinoa	85.82	20.27	94.32	599	reverse complement
CNT30730610	Musa acuminata	Corchorus capsularis	85.82	56.35	95.16	599	reverse complement
CNT30381505	Musa acuminata	Manihot esculenta	25.93	62.2	95.58	181	reverse complement
CNT30403504	Musa acuminata	Beta vulgaris	24.64	77.83	98.84	172	forward
CNT30525072	Musa acuminata	Phaseolus vulgaris	24.07	39.34	99.4	168	forward
CNT30630109	Musa acuminata	Vigna unguiculata	87.54	19.38	93.94	611	reverse complement
CNT30196858	Musa acuminata	Pisum sativum	85.82	32.26	93.82	599	reverse complement
CNT30503431	Musa acuminata	Nicotiana attenuata	85.82	43.37	96.49	599	forward
CNT30711335	Musa acuminata	Glycine max	53.15	94.64	92.99	371	forward
CNT3044711	Musa acuminata	Prunus dulcis	68.48	100.21	97.07	478	forward
CNT3090649	Musa acuminata	Solanum tuberosum	85.82	21.91	96.83	599	reverse complement
CNT30193801	Musa acuminata	Secale cereale	86.96	42.99	95.39	607	reverse complement
CNT30291213	Musa acuminata	Triticum aestivum	86.96	17.47	95.39	607	reverse complement
CNT30385574	Musa acuminata	Triticum turgidum	69.63	31.6	95.68	486	forward
CNT3087623	Musa acuminata	Vigna radiata	26.93	90.38	98.4	188	forward
CNT30511396	Musa acuminata	Solanum lycopersicum	62.46	47.65	91.06	436	reverse complement
CNT30554009	Musa acuminata	Oryza glaberrima	45.7	58.53	94.04	319	reverse complement
CNT30437708	Musa acuminata	Aegilops tauschii	18.48	41.35	93.02	129	forward
CNT30248027	Musa acuminata	Avena sativa	47.56	34.09	94.58	332	forward
CNT30664460	Musa acuminata	Triticum dicoccoides	14.33	27.62	98	100	reverse complement
CNT30310298	Musa acuminata	Camelina sativa	41.4	18.95	98.62	289	forward
CNT3062651	Musa acuminata	Arabidopsis lyrata	37.68	31.61	98.86	263	forward
CNT30266045	Musa acuminata	Brassica rapa	47.85	75.4	94.01	334	reverse complement
CNT30612440	Musa acuminata	Arabis alpina	32.52	100.89	96.48	227	reverse complement
CNT30460907	Musa acuminata	Saccharum spontaneum	86.96	18.22	95.72	607	reverse complement
CNT30141326	Musa acuminata	Lolium perenne	21.06	44.28	100	147	reverse complement
CNT3018333	Musa acuminata	Zea mays	86.96	21.26	95.72	607	reverse complement
CNT30655263	Musa acuminata	Rosa chinensis	85.82	33.19	93.16	599	reverse complement
CNT30206293	Musa acuminata	Helianthus annuus	85.82	27.26	96.83	599	reverse complement
CNT30688464	Musa acuminata	Triticum urartu	86.96	32.99	95.55	607	reverse complement
CNT30720907	Musa acuminata	Triticum spelta	63.32	43.29	95.7	442	forward
CNT30352524	Musa acuminata	Eragrostis tef	20.63	34.37	92.36	144	forward
CNT30596725	Musa acuminata	Oryza meridionalis	86.96	17.59	95.72	607	reverse complement
CNT30357533	Musa acuminata	Lactuca sativa	53.44	36.64	96.51	373	reverse complement
CNT30154922	Musa acuminata	Prunus persica	85.82	35.46	91.82	599	forward
CNT30483432	Musa acuminata	Chara braunii	24.07	82.35	88.69	168	reverse complement
CNT30412011	Musa acuminata	Papaver somniferum	85.24	22.05	96.47	595	reverse complement
CNT30646402	Musa acuminata	Cannabis sativa	67.77	37.39	91.12	473	forward
CNT3056240	Musa acuminata	Amborella trichopoda	35.82	87.41	98	250	reverse complement
CNT30319706	Musa acuminata	Asparagus officinalis	85.82	20.84	98	599	reverse complement
CNT30332807	Musa acuminata	Dioscorea rotundata	85.82	36.26	98.16	599	forward
CNT30148090	Musa acuminata	Brachypodium distachyon	86.96	20.9	95.55	607	forward
CNT30102893	Musa acuminata	Oryza rufipogon	87.11	43.12	93.91	608	reverse complement
CNT30576679	Musa acuminata	Oryza barthii	46.42	61.71	94.44	324	reverse complement

Expression of CNT30588765

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MDRSPRFGSISSDNRPMKTRFRYGSGGFP*

>peptide 2 (35 aa)
MFYFTPQWGFFSPFPHGTTSLSVTQEYLALQGGPC*

>peptide 3 (30 aa)
MLLGSERKLVMLSATGLSPSRVQHSFHRFA*

>peptide 4 (84 aa)
LGALAGDPGCFPLDDEAYPPSSHWPTLIPLIFGQLLRLNAFRGEPASSGFEWHFTPNHNSSADSSTSVGSDLHLVSPKLHPGHG*

>peptide 5 (54 aa)
MSRRLILQQARGQKSHSPPTAWELTVSCSISLPSGGSFHLSLTVLLRYRSPRSI*

Sequence

>CNT30588765
ATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCGACGATGAAGCTTATCCCCCATCGTCTCACTGGCCGACCTTGATCCCTCTTATTTTTGG
TCAACTGCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCACCCCTAACCACAACTCATCCGCTGATTCTTCAACA
TCAGTCGGTTCGGACCTCCACTTAGTTTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTGACAATCGCCCTATG
AAGACTCGCTTTCGCTACGGCTCCGGTGGGTTCCCTTAACCAAGCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAAATCACA
TTCTCCTCCCACTGCTTGGGAGCTCACGGTTTCATGTTCTATTTCACTCCCCAGTGGGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGG
TCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCGGGTCAGAGCGTAAGCTAGTGATGCT
TTCGGCTACTGGACTTTCGCCATCTAGGGTGCAGCATTCATTCCACCGCTTCGCCTAGCAGCACGACGCCTGTATTGCTCTCCCACAACCCCGTTTTC