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Detailed information on CNT30588049


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641622Musa acuminataNymphaea colorata77.4156.8992.511655reverse complement
CNT30318007Musa acuminataCorylus avellana77.3647.3294.681654reverse complement
CNT30550295Musa acuminataIpomoea triloba54.1698.8994.131158forward
CNT30519077Musa acuminataJuglans regia77.3689.0294.561654reverse complement
CNT30619309Musa acuminataSesamum indicum71.947093.041538reverse complement
CNT30283199Musa acuminataChenopodium quinoa77.3660.7993.831654forward
CNT30730504Musa acuminataCorchorus capsularis54.9699.1693.871175forward
CNT30632395Musa acuminataVigna unguiculata77.4154.6994.021655forward
CNT30194621Musa acuminataPisum sativum77.4159.2693.231655forward
CNT3047217Musa acuminataPrunus dulcis77.5546.5991.191658forward
CNT30383013Musa acuminataTriticum turgidum77.5562.4792.71658forward
CNT30445720Musa acuminataSaccharum spontaneum74.8875.2794.691601reverse complement
CNT30355977Musa acuminataLactuca sativa65.7680.391.111406forward
CNT30434068Musa acuminataPapaver somniferum77.4162.5293.721655forward
CNT30583270Musa acuminataEchinochloa crusgalli77.3273.4394.011653forward

Expression of CNT30588049

Peptides detected in this lncRNA

>peptide 1 (39 aa)
VTLKKLECSKQAHALDTLAWDNITGFRSYCVGLRDRSND*

>peptide 2 (33 aa)
MPTRDRRMLLLGLRRHLMRNQSLWVPGGVWSQG*

>peptide 3 (52 aa)
MPRHLISDAHEWINEISTFPVYYPVKPQPRERAWQNQRGKKTLLSLTLVRLCE

>peptide 4 (52 aa)
MIKRDSRGHSYFIVRGEILGFMKDEPLRKHLPRMFSLIKNESWGLEDDQIPS*

>peptide 5 (40 aa)
MNRKPGYGAQLRANPDTTKGVGRLRQQDGGHGSRNPLRSV*

Sequence

>CNT30588049
GTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCCACGCTCTGGATACATTAGCATGGGATAACATCACAGGATTTCGGTCCTATTGTGTTGGCCTTC
GGGATCGGAGTAATGATTAAGAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACCACTGCGAAAGC
ATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGA
TCGGCGGATGTTGCTCTTAGGACTCCGCCGGCACCTTATGAGAAATCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAA
TTGCAGAATCCCGTGAACAATCGAGTCTTTGAACGCAAGTTATGCCCGAGCCCATCCGGCTAAGGGCACGCCTGCCTGGGCTTGGAGCATGCATGTCGGG
ACCCGAAAGATGGTGAACTATGCCTGAGCGAGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGAAGCGATACTGACGTGCAAATCGTTCGTCTGACTTG
GGTATAGGGGCGAAAGACTAATCGAACCATCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCCCACGTGCGAGTTCTATCGGGTAAA
GCCAATGATTAGAGGCATCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCGCGGCTGCTTCGTTGAGCCGCGTCGCGGAA
TCGAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCCAACTGCGCGCTAACCCAGACAC
CACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCC
CGAAAATGGATGGCGCTGAAGCGCGCGACCCACACCCGGCCATCGGGGCGAGCGCCAAGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCCGCAAAACCCA
GGGCGCGAGCCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCAT
GTGAACGACACTTCTTGCACATGGGTTAGCCGATCCTAAGGGACGGGGGAAGCCCGTCCGAGAGCGTGTCTCCACGCGAGCTCCGAAAGGGAATCGGGTT
AAAATTCCCGAGCCGGGACGCGGCGGCGGACGGCAACGTTAGGAAGTCCGGAGACGCCGGCGGGGGCCCCGGGAAGAGTTATCTTTTCTGCTTAACGGCC
CGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGTCGGAAGAGCGCCGCACGTCGCGCGACGTCAAGTGCACCCCCGGCGGCCCTTGAAAA
TCCGGAGGACCGAGTGCCGCCCGCGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTAGCCCATGGAACAATGTAGGCAAGGGA
AGTCGGCAAAACGGATCCGTAACTTCGGGAAAAGGATTGGCTCTGAGGGCTAGCCATAGGGGTCCCGGCCCCGAACCCGTCGGCTGTCGGCGGACTGCTC
GAGCTGCTCTCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACCGGGAACGGCCCCCTCGGGGGCCTTCCCCGGGCGTTAAACAACCGACT
CAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCCGCGGATGCTCACGCAATGTGATTTCTGCCCAGTGCT
CTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAATAGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGA
CGCGCATGAATGGATTAACGAGATTTCCACTTTTCCTGTCTACTATCCAGTGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAG
ACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAAT