Detailed information on CNT30587644


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30607450Musa acuminataGossypium raimondii42.9810.5185.9156reverse complement
CNT30718598Musa acuminataMalus domestica golden26.4537.0792.7196reverse complement
CNT30622828Musa acuminataDaucus carota33.0613.2690120forward

Expression of CNT30587644

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MLLILVLALLFCPSLAEEELRGVKHKYADSGLGYYM*

>peptide 2 (30 aa)
VFDAVINFPDRPQLPRANILMTRNAFLLCY*

Sequence

>CNT30587644
TTGTCTTTGATGCAGTCATCAATTTTCCTGATAGGCCACAATTACCGCGAGCAAACATATTAATGACGAGGAACGCATTTTTGCTATGCTACTAATACTT
GTACTTGCTCTGCTATTCTGCCCAAGCCTGGCTGAGGAAGAGTTACGGGGAGTAAAACACAAATATGCTGATTCCGGTCTTGGTTACTATATGTAATGGT
CGAATCTTTCACGATAAATAAAAAGAAAAAGTAAGGCCATTCCATTTCGACAAAAGACCATACCCAAGTTCAATAGCTTTGCGTCTGCCATCCTGATGAT
TATTTTCCTACCCCGACCCCAAAGGGAAAGGTCCAAACCAAAAGGGAAGTAATTGTATCCTGG