Detailed information on CNT30587418


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639595Musa acuminataNymphaea colorata19.6331.5786.58149forward
CNT30221496Musa acuminataHordeum vulgare13.5751.2493.2103forward
CNT30144739Musa acuminataMedicago truncatula23.4538.3687.08178forward
CNT30435910Musa acuminataAegilops tauschii22.5321.4689.47171forward
CNT30659902Musa acuminataTriticum dicoccoides15.5538.3189.83118forward
CNT308389Musa acuminataZea mays20.2970.6489.61154forward
CNT3041102Musa acuminataChlamydomonas reinhardtii13.8327.0688.57105forward
CNT30365573Musa acuminataSorghum bicolor15.0232.2988.6114forward
CNT30358619Musa acuminataLactuca sativa12.1220.1882.6192forward

Expression of CNT30587418

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MAAAAWSWVEKMLQEHHRTSAPRAVRVSMRTAVWMVMWREPEMRAPAKGLAGPNSARHAMRPGIS

Sequence

>CNT30587418
GGTTGATTATGATTACAGGGTTAAATTAAGACTGAAACTGTTCATCTGGATTCAGATCTAAAAAGATATGGAAGTCTAAGATCTTAGTTAATGATCTATT
GCCCTCTTCGTTGATTAGCATGGCACCGACCAGATTCATAAACTCCAGGTTATATAGCCGATAGAGACAACAGCAGATCTGGGTTCAAGCTATCAAAACT
AGTTTAAAGGTAACAGGGAAACCAACCTCCTCAGATCCTGATCTGGATCTGGATCTGGAGCTCAAAATGAGACCTATGGATCCGAGAATTTCCAGAACAA
AATTGAAGCCCAAACTTCAAGATCCAAAATGAAGTATACCTTGCTCTTGGTAACGGAGTCGTTGACGTTGATGGCGGGGAAGAGCAGGGCGCCGCTGGCC
TGCATCTGGTAGAGTCGCTTGACGCCGGTGGTGGTCTCCTCCGACACGCCGACGAGGTCGGGGCCACCGTTGGGGCCCCAGTCGAGGCATCGCTCGGTGC
ACCACCAGTACTCGGCGAGGGTCTCTCCCTTCCAGGCGAAGACGGCGGCGGAGTCGCGGGCAATGGCGGCAGCGGCGTGGTCCTGGGTGGAGAAGATGTT
GCAGGAGCACCACCGGACTTCAGCACCGAGGGCGGTGAGGGTCTCGATGAGGACGGCGGTCTGGATGGTCATGTGGAGGGAGCCGGAGATGCGGGCGCCG
GCGAAAGGTTTGGCGGGGCCGAACTCGGCGCGGCACGCCATGAGGCCCGGCATCTCCAC