Detailed information on CNT30586725


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674836Musa acuminataSetaria viridis14.3526.1289.999forward
CNT3047350Musa acuminataPrunus dulcis8.5525.8888.1459forward
CNT30388443Musa acuminataTriticum turgidum13.1930.6487.9191forward
CNT30213619Musa acuminataHelianthus annuus13.9130.2885.4296forward
CNT30621647Musa acuminataCajanus cajan8.9926.8487.162forward

Expression of CNT30586725

Peptides detected in this lncRNA

>peptide 1 (81 aa)
DVHPLQLQAGVADVIPLGVDAVLVRHHLPELAADLVAALPGLDVQDLPHGRSFLTRVCNEEKERSRKIISVCVIYTEEYEE*

>peptide 2 (58 aa)
RRSPAPAAGGSRRRNSPWGRCRARPTPPPRTCRRSGCRIARLGCAGSPSWSIFSHSSV*

>peptide 3 (89 aa)
MPCSSDTTSQNLPPIWLPHCPAWMCRISLMVDLFSLECVTRKKKEAEKLYLYVLYIQKSTKNREIRLKDGEEGEREKGKECLQVASRWL*

Sequence

>CNT30586725
TAGACGTTCACCCGCTCCAGCTGCAGGCGGGAGTCGCCGACGTAATTCCCCTTGGGGTCGATGCCGTGCTCGTCCGACACCACCTCCCAGAACTTGCCGC
CGATCTGGTTGCCGCATTGCCCGGCTTGGATGTGCAGGATCTCCCTCATGGTCGATCTTTTCTCACTCGAGTGTGTAACGAGGAAAAAGAAAGAAGCAGA
AAAATTATATCTGTATGTGTTATATATACAGAAGAGTACGAAGAATAGGGAGATAAGACTGAAGGATGGAGAAGAGGGAGAGCGAGAGAAAGGCAAGGAA
TGCTTGCAAGTAGCTTCGAGATGGCTATGATGAGCTTTTGTAGATGTGGGAGGACTTGTTGATTTGGGAGAGGGGTGGGGGGGTTTAACTGAAACAAAAT
GCAAAAAAATAAATAAAAAAAGGCCCAATCCCTAATATATTGGAAATTTAGAATACATGACATGAAAATAAGTTCAGCTCATCAGATTGAGCTTGCTGGG
TAAAAAGAAGACGAAGGGAAGTAGCAATCATGTGAGCCTGCTGTTGTGTTACCAAGTTAGGTGGTCTTACTTGACAGTGTGATGACATCCACTCAAAATT
TTTTTCAGTGCATTCTCTCTCAAATCATTGACGATTTAATAAAATAGCTACAGGAGGTTTAGAGAAATAAATACAAGAGTAAGCCGACGG