CANTATAdb - search

Detailed information on CNT30586666

BLAST search results

BLAST vs Swiss-Prot:
sp|Q6YZA9|GL82_ORYSJ, E-value = 1e-87

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30308467	Musa acuminata	Triticum aestivum	7.82	28.04	88.33	60	forward
CNT30223115	Musa acuminata	Hordeum vulgare	7.82	29.85	88.33	60	forward
CNT30401458	Musa acuminata	Triticum turgidum	14.34	27.78	82.73	110	forward
CNT30240637	Musa acuminata	Avena sativa	22.29	43.96	82.46	171	forward
CNT30572973	Musa acuminata	Vitis vinifera	20.47	21.72	82.17	157	forward
CNT30117328	Musa acuminata	Oryza nivara	22.29	36.93	80.12	171	forward

Expression of CNT30586666

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MRTMEMPRVLSPGICITLAGVTLNPNLFPVSPGMSRPEREKSSAFTTMGSLQTNPFTRT

>peptide 2 (57 aa)
MVFLSTWKALARISSEMGGFDPNTASAMVMVPGFWLLRAPMAKVLVYPGLNWKWMRP*

Sequence

>CNT30586666
GGGAGATAGTTAATTCGTAAAGCCTATCAACTATGCGATAATACGCTAATAAAGATACTCACGAATTCTGAAACATGACGCACTTCATACGTGCTTTTCA
TAACATAGAAAGGCTGCTTAATTCCATTACAATAGCAAATGCAAACAGGTAGTCCACTGTTTGCTTATTGACACCAAAACACAGGAGCTAAGAGTGCAGC
TTATTCAATTCATCCGACTAGTTTTTCTTCGCGAACTGAGCCTGAAGCCAGTCGATGGTCTTCTTGTCCACTTGGAAAGCCTTGGCGAGGATTTCATCCG
AGATGGGGGGATTCGACCCGAACACAGCATCGGCGATGGTGATGGTGCCAGGGTTTTGGCTGCTGAGAGCACCGATGGCGAAGGTGTTGGTGTACCCAGG
GTTGAACTGGAAGTGGATGAGGCCTTGAGGGAACACAAACACATCACCCTTCTTCAGCATCTTGGTGAAGAGGCGGTTGTCGGTGTTGGATGTGACGAAG
CCGACTAAGAGCTGTCCCTCTATGACGGTGAGGATCTCGGTGGCACGGGGGTGAGTGTGGGGCGGGTTGAGGCCTTTGGGGATGTAGTCGATGCGAACCA
TGGAGATGCCGAGGGTGTTGAGTCCTGGAATCTGCATCACGTTGGCAGGCGTGACATTGAACCCGAACTTGTTTCCGGTATCGCCAGGCATGTCGAGGCC
AGAAAGAGAGAAGTCGTCGGCTTTCACAACCATGGGGTCCTTGCAGACGAACCCATTCACCCGCACT