Detailed information on CNT30586586


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 1e-155

BLAST vs NONCODE:
NONMEST001181, E-value = 4e-108

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641251Musa acuminataNymphaea colorata47.0537.8286.7669forward
CNT30528694Musa acuminataEucalyptus grandis48.3162.3488.21687forward
CNT30315749Musa acuminataCorylus avellana48.2442.2487.03686forward
CNT30513318Musa acuminataJuglans regia48.1767.2286.42685forward
CNT3044334Musa acuminataPrunus dulcis48.3175.0885.44687forward
CNT30169882Musa acuminataPistacia vera48.0333.1185.51683forward
CNT30311067Musa acuminataCamelina sativa48.2454.3285.28686forward
CNT30229549Musa acuminataAnanas comosus48.873.4486.89694forward
CNT30217432Musa acuminataKalanchoe fedtschenkoi42.6260.8486.47606forward
CNT30128346Musa acuminataCorymbia citriodora48.2473.8485.13686forward
CNT30370375Musa acuminataOryza glumipatula48.5972.4386.25691forward
CNT30153569Musa acuminataPrunus persica47.7575.2885.71679forward
CNT30576634Musa acuminataOryza barthii48.6664.4988.01692forward
CNT30603673Musa acuminataOryza punctata48.5269.7787.1690forward

Expression of CNT30586586

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MSLCWSGGIPSLSWILALTLSMVSEDSTSRVMVLPVRVFTKICI*

>peptide 2 (36 aa)
MMSNIDIRTLGTDSNQMQTNRHGSHKTPGQCSSGGG*

>peptide 3 (71 aa)
MKGGLLLNVIVGQGAAILELLAGEDQPLLVRRDALLVLDLGLNVVDRVRALDLEGDGLAGESLHKDLHTTT*

>peptide 4 (50 aa)
MPSLSWILALTLSIVSELSTSRVMVLPVRVFTKICIPPRRRSTRWRVDSF*

>peptide 5 (32 aa)
MTRSTKEITRKRKILSTRTVKYQERNDRHIKT*

Sequence

>CNT30586586
GAATTGCATCATAAATTATTGAAAGCATCGAAGCCTGTCATATTAGCATAAGTGGCGTCGCATATCGTGACAGCAGTTTATTATTGAACCGACGACAAAC
ACCGAACACAGAGACATGATGTCGAACATCGACATAAGAACACTTGGAACAGACTCCAACCAAATGCAGACCAACAGACACGGATCACATAAGACTCCAG
GACAATGCAGCAGCGGCGGCGGATGAGCAGGGCATTAGCTCACTGGCCACCACGGAGGCGGAGCACCAGGTGAAGAGTGGACTCCTTCTGAATATTGTAA
TCGGCCAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCCGGTGGAATACCCTCCTTGTCCTGGATCTTTGCCTTAACGT
TGTCGATCGTGTCAGAGCTCTCAACCTCCAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCATACCTCCCCTGAGTCTCAGCACCAGATG
AAGGGTGGACTCCTTCTGAATGTTATAGTCGGCCAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGCCTCTGTTGGTCCGGAGGGATGCCC
TCCTTGTCCTGGATCTTGGCCTTAACGTTGTCGATCGTGTCCGAGCTCTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTCACAAAGATCTGCA
TACCACCACGTAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGCCAAGGTGCGGCCGTCTTCGAGCTGCTTACCAGCGAAGAT
GAGCCTCTGCTGGTCGGGGGGGATCCCCTCCTTGTCTTGGATCTTGGCCTTAACATTGTCGATGGTGTCGGAGGATTCAACCTCTAGGGTGATGGTCTTG
CCAGTGAGGGTTTTCACGAAGATCTGCATCTGAATATAACACAAAAGAGGAATCAGCATCCGACCGAATAAAATAGATTAAGACCGACATAGATCAAACA
GACAACCCAACATCATGTAAGAATAACACGAAAACAACGCGACGTCTCTAAATCAACAAGGGAGAAACCAAGTTTCATAGATCAGATACACAGGGGGGTC
GATCCAAAGACACGTCTCGAAGTTTCAAGATCGATGACCAGATCCGTAAAAGAAATTACAAGGAAACGAAAAATCTTGTAGATCAGATACACAGGGGGAT
CGATCCAAAGATACATCTAAAAGTTTCAAGATAGATGACCAGATCCACAAAAGAAATTACAAGGAAACGAAAAATCTTGTCGACGAGAACGGTTAAATAT
CAGGAAAGAAACGATCGCCATATCAAAACCTGAGAATACATGAACAATACTCAAAGAAAAAGAAGAAAAAAAAAGAAAAAAATACCCAAAATTAAAAGCG
AGTAAAGAAGAAAATATACCTT