Detailed information on CNT30586413


BLAST search results

BLAST vs Swiss-Prot:
sp|P50156|TIP11_ORYSJ, E-value = 2e-35

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30229564Musa acuminataAnanas comosus67.4425.3388.51174forward
CNT30331222Musa acuminataDioscorea rotundata28.299.387.6773forward

Expression of CNT30586413

Peptides detected in this lncRNA

>peptide 1 (74 aa)
GPAHEDVGAHDEADGDGGDGAETVYTRPKVMTISSTSASHALTPDSPKVPVSSPPVEKRSRRQATVEPSSCAIQ*

>peptide 2 (30 aa)
GPPTRMLAPTMKPMAMGAMVPRRCTRGRRS*

Sequence

>CNT30586413
GGGCCCGCCCACGAGGATGTTGGCGCCCACGATGAAGCCGATGGCGATGGGGGCGATGGTGCCGAGACGGTGTACACGAGGCCGAAGGTCATGACGATCT
CCAGCACCAGCGCCTCCCACGCGCTCACCCCGGACAGCCCGAAGGTGCCGGTCTCGAGCCCGCCGGTGGAGAAGCGGAGCAGGAGGCAGGCCACCGTGGA
GCCCAGCAGCTGCGCGATCCAGTAGAGGATGCCCCGCAGCAGCGTGATGTTCCCGCCC