Detailed information on CNT30586289


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674439Musa acuminataSetaria viridis36.9744.6890.48105forward
CNT30287995Musa acuminataTriticum aestivum35.9226.8493.14102forward
CNT30387749Musa acuminataTriticum turgidum35.9216.0194.12102forward
CNT30552083Musa acuminataOryza glaberrima36.9716.0390.48105forward
CNT30246208Musa acuminataAvena sativa36.9718.5292.38105forward
CNT30659185Musa acuminataTriticum dicoccoides35.9219.1494.12102forward
CNT30134237Musa acuminataLolium perenne36.9716.6991.43105forward
CNT3016441Musa acuminataZea mays22.898.789.2365forward
CNT30216655Musa acuminataKalanchoe fedtschenkoi23.5918.5695.5267forward
CNT30620908Musa acuminataCajanus cajan36.2714.5187.38103forward
CNT30357767Musa acuminataLactuca sativa21.8315.0187.162forward
CNT30580392Musa acuminataEchinochloa crusgalli36.2718.6392.23103forward

Expression of CNT30586289

Peptides detected in this lncRNA

>peptide 1 (43 aa)
LCSRTVHAIASACLSRAFSCRRCGTRRSRGCPCSSSRGGRSWP*

>peptide 2 (90 aa)
SAVEQCMQSLLHACLGPSVVVGAALVGLGVVLAVVLEGVGVGLELVPGVAGRCGLGSCAFVETAPVVESLTLEAAVAAMSMNHTSCSWSR*

Sequence

>CNT30586289
CTCTGCAGTCGAACAGTGCATGCAATCGCTTCTGCATGCTTGTCTCGGGCCTTCAGTTGTCGTAGGTGCGGCACTCGTCGGTCTCGGGGTTGTCCTTGCA
GTAGTTCTCGAGGGGGTCGGAGTTGGCCTTGAGCTTGTCCCGGGCGTGGCTGGCCGCTGCGGCCTGGGGAGTTGTGCCTTCGTGGAGACCGCCCCTGTGG
TGGAAAGTCTCACGCTGGAAGCAGCTGTTGCCGCCATGAGCATGAACCACACCTCTTGCAGTTGGTCCCGATGATAGTAGTGTA