Detailed information on CNT30586190


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697185Musa acuminataOryza sativa33.7222.4886.2187forward
CNT30677073Musa acuminataSetaria viridis41.097.0388.68106forward
CNT30640852Musa acuminataNymphaea colorata37.2127.6782.2996forward
CNT30702712Musa acuminataQuercus lobata46.1214.2287.39119forward
CNT30631336Musa acuminataVigna unguiculata32.1735.0285.5483forward
CNT30477141Musa acuminataArabidopsis halleri37.635.6683.5197forward
CNT30367502Musa acuminataSorghum bicolor26.7410.986.9669forward
CNT30104230Musa acuminataOryza rufipogon33.723.5386.2187forward
CNT30551796Musa acuminataOryza brachyantha33.7211.1187.3687forward

Expression of CNT30586190

Peptides detected in this lncRNA

>peptide 1 (54 aa)
PGRRRPQPILSVQPRRSSRFRGLRQAGFLAPQSAPTHCPANPLEENLRIAPEMY*

>peptide 2 (43 aa)
GQVEEDLSPYFLCNLEGPLDSVVSVKQDFWLHNRHQPIVLQTH*

Sequence

>CNT30586190
GGCCAGGTAGAAGAAGACCTCAGCCCATACTTTCTGTGCAACCTCGAAGGTCCTCTCGATTCCGTGGTCTCCGTCAAGCAGGATTTCTGGCTCCACAATC
GGCACCAACCCATTGTCCTGCAAACCCATTAGAAGAGAACTTGAGGATTGCTCCGGAGATGTACTGACCCAGACCAGGTGCTGAGACAAGGAGGGTCCTG
TAAGCTTGTCGGTTCGCCTCGGTGTTCTCCAGCCCGATCGTTGCGAGTCTTTTCCCGC