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Detailed information on CNT30586133


BLAST search results

BLAST vs Swiss-Prot:
sp|Q36284|NU5M_MAIZE, E-value = 7e-70

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30619448Musa acuminataSesamum indicum21.7542.2788.57481forward
CNT30197509Musa acuminataPisum sativum30.3929.5388.39672forward
CNT30633270Musa acuminataCapsicum annuum15.5141.2386.3343reverse complement
CNT30182368Musa acuminataSecale cereale22.0324.0190.97487forward
CNT30299594Musa acuminataTriticum aestivum18.0952.9192.75400forward
CNT30220864Musa acuminataHordeum vulgare30.6250.2690.25677forward
CNT30394428Musa acuminataTriticum turgidum21.5365.8490.97476forward
CNT30541214Musa acuminataBrassica napus2.9921.7195.4566reverse complement
CNT30439823Musa acuminataAegilops tauschii9.1845.4196.06203reverse complement
CNT30468144Musa acuminataSaccharum spontaneum37.2729.2887.62824forward
CNT30210175Musa acuminataHelianthus annuus10.2760.3789.87227forward
CNT30627916Musa acuminataDaucus carota30.3918.6389.43672forward
CNT30427311Musa acuminataPapaver somniferum22.2513.3689.63492forward
CNT30574574Musa acuminataVitis vinifera30.3919.9689.58672forward
CNT3056795Musa acuminataAmborella trichopoda13.0754.3287.2289forward
CNT30104639Musa acuminataOryza rufipogon33.5167.4987.04741forward
CNT30577102Musa acuminataOryza barthii10.72104.4183.97237forward
CNT30115468Musa acuminataOryza nivara28.5818.3187.18632forward

Expression of CNT30586133

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MDGIHSLAFLLALEKPPVLTPLWKLCCLSSGS*

>peptide 2 (37 aa)
MKNLIEEPAFIEEAIESITKSTCLKLELIRYWIDIIR*

>peptide 3 (32 aa)
MKDDLESTQEDRESHIREKVTNGVEPSNIAKA*

>peptide 4 (44 aa)
MELSQVTLQRHNDSRVGIYPPSEPDVRVSPHPALCRGIYTHCFP*

>peptide 5 (38 aa)
MSFVMVGTANSDSARISFCGSTKGELAQKWDRGKLPGV*

>peptide 6 (53 aa)
MAKVSDFGLIETLYKAEPFPLRRALFLSVRFDDLASFFSGKVIYSGYSVDFIS*

Sequence

>CNT30586133
GTAGACATTAAGAAGAGAATTGAGCGTTACCTAATATAGAATAGTGTAAACAACCAACCAACTCTTGTACTATAAGAAAAGCGCGTGCAGGATCTAGTCA
TCTTTGACCATTTTAGTGACAAAACTCAAAAGAAAGAAGAGAAAGAACTGGGACCTACATAACAGGTTGCTTGCTCACCAAGCCGTCCTGTCCTGGCAAA
CTCATATGGTTCTCTTATTCTTCTATTCTATTATTTACTTGACTTATTTATACTACAACTAGTCACTATCAAAATGAAAGACGATCTAGAATCTACCCAA
GAAGATAGAGAGTCCCACATACGAGAAAAGGTCACAAATGGAGTTGAGCCAAGTAACATTGCAAAGGCATAATGATAGTAGGGTCGGGATATACCCGCCC
TCCGAACCGGACGTGAGGGTCTCCCCTCATCCGGCTCTCTGCAGGGGAATCTATACTCACTGCTTCCCCTAATATCCTCCCTTTACCACATAATGGGGGT
TTACAGGAAATCCCAGAGGCTCGCTCGGATGCTATACCTGACATTCGGACTCTTCTGTCACTAGACTCACTATAGTAGTCCGTCCGGCTGCTCTTGCTTA
AATCATTACTCCTAATTCTCCCGTGCTCTAGCAATTGCGCTCCCTAGACCAACCACTAAACCATGTAGTTAGATAAGGACAATGAATCCATAGTTACGGG
AATAACGGAATGAATAGGGATTCCATACTATCTATAGAATATCCAAATTAGGATGAAACTATAATCAATCCGAACTATCTCTTCTCTCTCTATAGATGTA
TCTGGTCAGAGATAGTACAGTACTTAAATCACTATAGTAATGAAATGGGATGGATGGTAGAGGGCTGCCTGCGCCCGATGAACTTGTCCCATTGTCTCTA
GGGACCTCGTGGCATACAACCTAACGACTCCAGCGTTATAGTCGCCCCCATTCGTTCTCTGTTTTTTGACTGCCTCGTGGACGGACGAAAGAAGGGAAGT
GACATAAGGAGGTATTGAAGGCTCGCGAAGTAGACAGCAAGCCCCCTAAGTCCTGTGTTGCCGCGCTCGCGGATTTGAAAGCTGGCAAGGGGATGGATGG
GATTCATTCACTTGCATTCCTGCTAGCACTAGAAAAGCCTCCGGTCTTAACGCCCTTATGGAAGCTGTGCTGCCTTTCCTCGGGTTCGTAGAGTAGGGTT
GACCGTTTACCCACAACGGAGGAGCCGCCCCCACCTCAGGGAAGCGGCCACGGTTCATAACGAACTCTTCGCACAACAAATCCACTTTGAAGTTGACTTA
TTCGCTCGGCCAATCCTCGGAATGTGTACGAGACACCATAAGGACCAAGTATCTCAATAGCACCCTTGTCTAAAGCTTCGAATGAGACTGAATATCCGAA
ACGAAGGAACGCTCTTAATAGAAAGTCATGAAAAACTTGATCGAAGAACCAGCGTTTATTGAAGAAGCAATAGAGTCGATTACTAAAAGTACTTGTTTGA
AGTTGGAATTGATCCGCTACTGGATTGACATTATACGCTAGAGAAGCACCTGAAGTACTAAACATAATAGGTATGAGTTTTGTAATGGTTGGAACAGCAA
ACTCGGATTCGGCAAGAATCTCATTTTGTGGTAGTACGAAGGGGGAATTGGCCCAAAAATGGGATAGGGGTAAGCTGCCAGGTGTCTAGGCTTATGAAAA
TGCCCCCCGAACCGCGCGAAATGGTCGCCTATTACACGGCTCACTAAATCTGCCTTGCCTTGGGGTAGTGGGCTATTATTCGTCGGCGGCGCACGCAGGG
CCTCGGTTTGCTACGTGGACTTCCTACAGAGTGCAATGGAACCCAGCTAAACTCCTAAGAGCCAAAAGGAAAGAAAAGAAAGAAGTCACTTTTACCGATT
CATCCAGAAAGAAGGGTAAGACCTCTATCACTCATCAGTCGATTATGACATTAATTCCATTTGAGCTTTGGAGAGTTACTAGACTTAACATAGCGGGCGC
ACCTCTTCTCTAAACATCAATGGCTAAAGTTAGTGACTTTGGGCTGATAGAGACCCTCTATAAGGCAGAACCTTTTCCCCTGCGCCGAGCTTTGTTCTTG
TCAGTGAGATTCGATGATCTGGCTTCTTTCTTCTCTGGAAAAGTCATATACTCTGGTTATTCTGTTGATTTCATAAGCTAACCTGGCTTCTTTCTTTTCT
GGAAAAGTCAT