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Detailed information on CNT30585986


BLAST search results

BLAST vs Swiss-Prot:
sp|P93822|ERF97_ARATH, E-value = 2e-12

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30693243Musa acuminataOryza sativa24.749.3482.74168forward
CNT30534348Musa acuminataEucalyptus grandis22.8314.3487.74155forward
CNT30515949Musa acuminataJuglans regia22.398.2786.18152forward
CNT30279406Musa acuminataChenopodium quinoa22.5313.8281.7153forward
CNT30525755Musa acuminataPhaseolus vulgaris23.7123.0381.37161forward
CNT30630024Musa acuminataVigna unguiculata20.6216.3285.71140forward
CNT30170564Musa acuminataPistacia vera20.627.7580.71140forward
CNT30437038Musa acuminataAegilops tauschii22.5319.9283.66153forward
CNT30130161Musa acuminataLolium perenne22.8318.4583.23155forward
CNT30621468Musa acuminataCajanus cajan20.626.4685.71140forward
CNT30153825Musa acuminataPrunus persica21.9427.2482.55149forward
CNT30572283Musa acuminataVitis vinifera24.8935.8184.62169forward
CNT30704079Musa acuminataPrunus avium8.8421.6688.3360forward
CNT30100016Musa acuminataOryza rufipogon20.6213.3682.14140forward
CNT30116505Musa acuminataOryza nivara24.7422.9282.74168forward

Expression of CNT30585986

Peptides detected in this lncRNA

>peptide 1 (77 aa)
MTERGSDRRPRSREGGSGTASGGTAAAATSRPEDSTVLLWLLGLPVAAGTALGLLQASEKAKLVLALAPRKSRAALS*

>peptide 2 (94 aa)
GDGLTVSESRDLLRRREVEVESERERLRLRRRRAIVRVEIYDGGGVGVALHGDGGRRLEAGDEHRRAKGQLAVIRGRLCVQEKELLGRRGGGWV*

Sequence

>CNT30585986
GGGGGACGGTCTGACGGTTTCCGAGTCACGCGATCTCCTCCGGCGGAGGGAGGTTGAGGTCGAAAGCGAAAGGGAACGTCTTCGCCTGCGGCGGAGGAGA
GCGATAGTCCGGGTGGAGATCTACGACGGAGGAGGAGTCGGAGTCGCTCTGCACGGCGACGGCGGGCGGCGGCTGGAAGCAGGCGACGAACATCGGCGGG
CAAAGGGCCAGCTGGCGGTTATTCGTGGCCGACTTTGCGTCCAGGAAAAAGAACTGCTGGGCCGACGGGGCGGCGGTTGGGTATGACTGAAAGGGGAAGC
GACCGCCGGCCCAGATCGAGGGAGGGTGGGAGCGGAACAGCGAGTGGAGGCACCGCCGCCGCAGCCACCTCGCGGCCTGAGGATTCCACGGTGCTGCTCT
GGCTACTGGGGCTGCCAGTGGCAGCCGGGACGGCGCTGGGGCTGCTGCAGGCGTCTGAGAAGGCGAAGTTGGTCTTGGCCTTGGCGCCGCGGAAATCGCG
GGCGGCGTTGTCGTAGGCTCTGGCGGCCTCCTCTGCGGTGTCGAAGGTGCCGAGCCAGACTCGGGTCTTCTTGCTGGGGTCGCGTATCTCGGCGGCGTAC
CGGCCCCACGGCCGCTTCCTCACCCCTCGGAAACGCATCTCCTTCCCTTCACCGTCGGCGACGGTGCTGAGCTTCCCCC