Detailed information on CNT30585857


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3037914Musa acuminataCucumis melo20.7619.4586.47414reverse complement

Expression of CNT30585857

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MKLTKAKYLSHCARPFEAGLCEVPLFLLPSYRKTKLD*

>peptide 2 (38 aa)
RAFTMSPEQFQYIWRKTIPHIEVGMGSGVFHVSPWCQV*

>peptide 3 (50 aa)
MIAHSTKELYKRNCPSSLTRYCWIGLSPIVQDSPLQPPVGVRALSQSQCG*

>peptide 4 (57 aa)
PGFYHVSRTISVHMAQDDSTYRGRNGIGCFSRLTLVPGLIQSSHRFPYGYLVTTSPQ*

>peptide 5 (70 aa)
GLLPCLPNNFSTYGARRFHISRSEWDRVFFTSHLGARFDSIQPQVPLRLPCYDFTPVKDLTVVCANKTTK*

Sequence

>CNT30585857
CCGGGCTTTTACCATGTCTCCCGAACAATTTCAGTACATATGGCGCAAGACGATTCCACATATCGAGGTCGGAATGGGATCGGGTGTTTTTCACGTCTCA
CCTTGGTGCCAGGTTTGATTCAATCCAGCCACAGGTTCCCCTACGGCTACCTTGTTACGACTTCACCCCAGTAAAAGACCTAACCGTGGTATGCGCCAAT
AAGACTACCAAATGACTTTGTGGCACAAGTGGTACACAGAAGTCATGGGTTATCATTGGTCCGATGCTTCGGGCTAAACCTGTTCCCAGGGTGTGACGGG
CGGTGTGTACAGGGCCCGGGTACATATTCACCGCAGCATGCTGATCTGCGATTACTAGCGATTCCAACTTCATGTTCCCGAGTTGCAGAGAACAATCCGA
ACTGAGGCAATCTTTCTGGATTCGCTCAGCCTTACTGCCTTGCTTCCCATTGTAATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATGAGGGCCATGCT
GACTTGACGTCATCCCCACCTTCCTCCAGTATTTCACTGGCAGTCCCTCGTGAGTGCGGCACGAACCTTTGGATTTGTTTCGGAGCGGGGCGAATACTAT
TACCACGTAGTTACCACACCACCGGGCGGCTTGCCAGAATGCCGAGTATTCAGTAGCTGCTACCTTGACGTCGTCGCCGGTTGACAGGTTGAAGTGCTTC
CTTTCGAAAGGAACCGTATACCTATAGTGAAATGATTGCGGAAAGCACAATGACGTGCTGACATTCAATCAAGTGGTAGCGCTGTGACTCGGCTCCTCGG
CTTACTTCGGTGGCCATTTGTCCTTAGGCGCATGTCTCAGCAACAAAAAATGAGGGTTTCGCTCGTTATAGGACTTGACCAAACATCTCACGACACGAGC
TGACGACAGCCATGCAGCACCTGTATGAAAGTAAGTACCATCCTGTTAAGGACAGGTCTTGTTGTTCATATGTCAAGAGCTGGTAAGGTTTTGCGCGTTG
TATCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCCCCGTCAATTCCTTTGAGTTTCGGTCGAGCGACCGTACTCCCCAGGCGGAGTGTTTAACGC
GTTAGCTGGGCCCCTGATCTGCGTAGACCAAGGGCGAACACTCATCGTTTACGGCATGGACTACCTGGGTATCTAATCCAGTTTGCTCCCCATGCTTTCG
CACCTCAGCGTCAGTAGGGACCCAAAGAGCTGCCTTCGCTTTTGGCCTTCCTTCGTAGATCTACGGATTTAACCCCTACACACGAAATGAAACTCTCCTC
TGTCTCACTCAAGTGAATTGGTTTCGAGAGCATTCCGCCGGTTTTTGGCGACTTGAACTTGCAACCCGATTCACTGCCGTAGTGCCCTTTACGCCTAGTC
ATTCCGAAGAACACTTGCCCCCCCCGTATTACCGCGGCTGCTGGCACGGAGTTTGCCGGGGCTTCTTCCTCGAGTCCTGTCATGATCGCGCACTCGACGA
AAGAGCTTTACAAGCGGAATTGCCCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCAGCCCCCCGTGGG
AGTCCGGGCCCTGTCTCAGTCCCAGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTTAGCCTTTACCTGACCAACTACCTAATAC
TACGCAGGCTCATCAAACAGCGCTTTTGAGCTTTCTTCAGGATTTGGCCCGAACTGTTCGGCAGATTCCCACGCGTTACGCACCTGTTCGCCACTTTGTT
CTCAACTATGGAAGATGAAGCTAACTAAAGCGAAATATCTAAGCCATTGCGCGCGCCCTTTTGAAGCAGGGCTTTGCGAGGTGCCTCTTTTCCTTCTGCC
CAGCTACCGGAAAACGAAGTTAGACTAGCATGTGTTAAGCATGTCGCTAGCGTTCCTTCTGAGCCAGGATCAAACTCAGATTTGGACTATGATT