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Detailed information on CNT30585815


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697843Musa acuminataOryza sativa40.9631.7395.88994reverse complement
CNT30670953Musa acuminataSetaria viridis14.0937.0594.44342reverse complement
CNT30524653Musa acuminataSetaria italica13.3527.0598.46324forward
CNT30548882Musa acuminataIpomoea triloba42.2738.9295.131026forward
CNT30378671Musa acuminataArabidopsis thaliana6.2253.5596.69151reverse complement
CNT30632593Musa acuminataVigna unguiculata42.4861.0893.791031forward
CNT30504983Musa acuminataNicotiana attenuata15.5720.7697.62378forward
CNT30158473Musa acuminataPistacia vera1.9822.0210048forward
CNT30635645Musa acuminataCapsicum annuum18.1371.0889.77440forward
CNT3098505Musa acuminataSolanum tuberosum18.7146.2892.29454reverse complement
CNT30304298Musa acuminataTriticum aestivum41.3337.9195.611003reverse complement
CNT30221494Musa acuminataHordeum vulgare23.8646.6295.68579forward
CNT30400948Musa acuminataTriticum turgidum41.3340.1295.711003reverse complement
CNT30569653Musa acuminataActinidia chinensis13.0247.0994.94316reverse complement
CNT30234810Musa acuminataBrassica oleracea23.0373.8491.41559reverse complement
CNT30554921Musa acuminataOryza glaberrima5.6939.0996.38138forward
CNT30147394Musa acuminataMedicago truncatula42.2351.4694.731025forward
CNT30440683Musa acuminataAegilops tauschii32.6381.9995.33792forward
CNT30247816Musa acuminataAvena sativa28.9733.6595.31703forward
CNT30662061Musa acuminataTriticum dicoccoides41.3352.2795.811003reverse complement
CNT3081478Musa acuminataBrassica juncea30.4563.8291.47739forward
CNT30263293Musa acuminataBrassica rapa5.1529.988.8125reverse complement
CNT30143344Musa acuminataLolium perenne44.8348.6494.761088reverse complement
CNT3016633Musa acuminataZea mays41.5352.7594.541008reverse complement
CNT30229838Musa acuminataAnanas comosus18.2510093.68443reverse complement
CNT30218527Musa acuminataKalanchoe fedtschenkoi30.4949.795.95740reverse complement
CNT3067373Musa acuminataLeersia perrieri11.5492.7292.14280forward
CNT30655299Musa acuminataRosa chinensis42.2336.1294.831025forward
CNT30203595Musa acuminataHelianthus annuus41.1654.5393.49999forward
CNT30689128Musa acuminataTriticum urartu41.3353.9595.111003forward
CNT30721611Musa acuminataTriticum spelta9.2348.5997.77224reverse complement
CNT30595506Musa acuminataOryza meridionalis13.63095.76330reverse complement
CNT30360998Musa acuminataLactuca sativa11.8799.3195.14288forward
CNT30369805Musa acuminataOryza glumipatula39.6467.0993.87962forward
CNT30154718Musa acuminataPrunus persica15.1252.9694.82367forward
CNT30420891Musa acuminataPapaver somniferum24.3121.9789.32590reverse complement
CNT30323793Musa acuminataAsparagus officinalis7.9160.7692.19192forward
CNT30151602Musa acuminataBrachypodium distachyon9.1944.5192.38223reverse complement
CNT30104648Musa acuminataOryza rufipogon19.279.9394.64466reverse complement
CNT30575706Musa acuminataOryza barthii39.5139.3594.06959forward
CNT30582488Musa acuminataEchinochloa crusgalli40.9681.8895.98994forward
CNT30495774Musa acuminataDigitaria exilis16.1999.2496.18393reverse complement
CNT30116696Musa acuminataOryza nivara40.9625.0795.98994reverse complement
CNT30604605Musa acuminataOryza punctata3.5437.2389.5386reverse complement
CNT3040451Musa acuminataMarchantia polymorpha7.4630.8391.71181forward

Expression of CNT30585815

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MATEVSRGAESQRYHLIECQHVIVLSAIISL*

>peptide 2 (90 aa)
MTGLEEEAPANSVPAAAVIRGGQVFFGMTRRKGHYGSESGCKFKSPKTGGMLSKPIHLSETEESFISCVGVKSVDLRRKAKSEGSSLGPY*

>peptide 3 (59 aa)
MILSFLLIAFFSYETFFSINSILLQSSIYLLSFFILISFPRYTIEGKLVVRSIGFPLYT*

>peptide 4 (72 aa)
MKLESLVIADQHAAVNMYPGPVHTARHTLGTGLARSIGPMITHDFCVPLVPQSHLVVLLAHTTVRSFTGVKS*

>peptide 5 (47 aa)
MTSSQHGPHGLGHTRATMAITMGSKAVRLSESRKIASVRIVLCNSGT*

>peptide 6 (50 aa)
MWFNSIQRAKPYQLLTYEQQDLSLTGWYLLSYRCCMAVVSSCREMFGQVL*

>peptide 7 (34 aa)
MSARHCAFRNHFTIGIRFLSKGSTSTCQPATTSR*

>peptide 8 (42 aa)
MMLSWSFRMISHTGTETGPGLPRGAAVGNLGQWAKARSSNIA*

>peptide 9 (31 aa)
MRLSFLLIAFFSKVAYIFFLFSFSFHFPDTQ*

>peptide 10 (33 aa)
MSVRPWSTQIRGPANALNTPPGEYGRSTETQRN*

Sequence

>CNT30585815
TCGCATTCTATGAGACTTTCTTTTCTATTAATAGCATTCTTCTCCTATGATACTTTCTTTTCTATTAATAGCATTCTTTTCCTATGAGACTTTCTTTTCT
ATTAATAGCATTCTTCTCCAAAGTAGCATATATCTTCTTTCTTTTTTCATTCTCATTTCATTTCCCCGATACACAATAGAGGGTAAGTTAGTAGTACGAT
CGATTGGATTTCCCCTATATACATAAATAAGTAGTACGTCCGGTTCACCAGGTTCTACCACAGCAGAGCCCAATCATAGTCCAAATCTGAGTTTGATCCT
GGCTCAGAAGGAACGCTAGCGACATGCTTAACACATGCTAGTCTAACTTCGTTTTCCGGTAGCTGGGCAGAAGGAAAAGAGGCACCTCGCAAAGCCCTGC
TTCAAAAGGGCGCGCGCAATGGCTTAGATATTTCGCTTTAGTTAGCTTCATCTTCCATAGTTGAGAACAAAGTGGCGAACAGGTGCGTAACGCGTGGGAA
TCTGCCGAACAGTTCGGGCCAAATCCTGAAGAAAGCTCAAAAGCGCTGTTTGATGAGCCTGCGTAGTATTAGGTAGTTGGTCAGGTAAAGGCTAACCAAG
CCAATGATGCTTAGCTGGTCTTTTCGGATGATCAGCCACACTGGGACTGAGACAGGGCCCGGACTCCCACGGGGGGCTGCAGTGGGGAATCTTGGACAAT
GGGCGAAAGCCCGATCCAGCAATATCGCGTGAGTGAAGAAGGGCAATTCCGCTTGTAAAGCTCTTTCGTCGAGTGCGCGATCATGACAGGACTCGAGGAA
GAAGCCCCGGCAAACTCCGTGCCAGCAGCCGCGGTAATACGGGGGGGGCAAGTGTTCTTCGGAATGACTAGGCGTAAAGGGCACTACGGCAGTGAATCGG
GTTGCAAGTTCAAGTCGCCAAAAACCGGCGGAATGCTCTCGAAACCAATTCACTTGAGTGAGACAGAGGAGAGTTTCATTTCGTGTGTAGGGGTTAAATC
CGTAGATCTACGAAGGAAGGCCAAAAGCGAAGGCAGCTCTTTGGGTCCCTACTGACGCTGAGGTGCGAAAGCATGGGGAGCAAACTGGATTAGATACCCA
GGTAGTCCATGCCGTAAACGATGAGTGTTCGCCCTTGGTCTACGCAGATCAGGGGCCCAGCTAACGCGTTAAACACTCCGCCTGGGGAGTACGGTCGCTC
GACCGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATACAACGCGCAAAACCTTACCAGCTCTTGACATATGA
ACAACAAGACCTGTCCTTAACAGGATGGTACTTACTTTCATACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTTGGTCAAGTCCTATAA
CGAGCGAAACCCTCATTTTTTGTTGCTGAGACATGCGCCTAAGGACAAATGGCCACCGAAGTAAGCCGAGGAGCCGAGTCACAGCGCTACCACTTGATTG
AATGTCAGCACGTCATTGTGCTTTCCGCAATCATTTCACTATAGGTATACGGTTCCTTTCGAAAGGAAGCACTTCAACCTGTCAACCGGCGACGACGTCA
AGGTAGCAGCTACTGAATACTCGGCATTCTGGCAAGCCGCCCGGTGGTGTGGTAACTACGTGGTAATAGTATTCGCCCCGCTCCGAAACAAATCCAAAGG
TTCGTGCCGCACTCACGAGGGACTGCCAGTGAAATACTGGAGGAAGGTGGGGATGACGTCAAGTCAGCATGGCCCTCATGGGCTGGGCCACACACGTGCT
ACAATGGCAATTACAATGGGAAGCAAGGCAGTAAGGCTGAGCGAATCCAGAAAGATTGCCTCAGTTCGGATTGTTCTCTGCAACTCGGGAACATGAAGTT
GGAATCGCTAGTAATCGCAGATCAGCATGCTGCGGTGAATATGTACCCGGGCCCTGTACACACCGCCCGTCACACCCTGGGAACAGGTTTAGCCCGAAGC
ATCGGACCAATGATAACCCATGACTTCTGTGTACCACTTGTGCCACAAAGTCATTTGGTAGTCTTATTGGCGCATACCACGGTTAGGTCTTTTACTGGGG
TGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGTGGCTGGATTGAATCCTTCGCGAGCCCACACTTGATTGACTAAACTTAAGACGACCTGCACTGATG
CTTATGTTTACTAAACAAAGGACCTGATGCTTATGTTTCTTTTCTACTTTTCCATTTTCCTTCTTGTTTCTCCATCTCCAATCAAGACAAACCTGGCACC
AAGGTGAGACGTGAAAAACACCCGATCCCATTCCGACCTCGATATGTGGAATCGTCTTGCGCCATATGTACTGAAATTGTTCGGGAGACATGGTAAAAGC
CCGGAAAGATAGGAGTATTATGAGTTT