Detailed information on CNT30585809


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30334956Musa acuminataCynara cardunculus55.7361.9891.11123reverse complement

Expression of CNT30585809

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MCRPSQTPHLTMSSARIGPLGGPWVQKEGPGPASDSRNK*

>peptide 2 (36 aa)
MHAPTRTLHRRSGSAGGATPREGSRPLASLCLPGFRT

>peptide 3 (37 aa)
MAHLELSIPRRGSTKQPRRPTYLKFENRSRALRPRCL*

>peptide 4 (53 aa)
MSTTGRGRHSVLRIFKGRRGRTGRRATCGALPTAGPYLRLSRFQGGRAVKQKR*

>peptide 5 (98 aa)
CGNFSDTSSFKFRRSKGSIGHAFTVRRIGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNVFRPDRPARRALGPKGGAGPRLRLTE*

>peptide 6 (86 aa)
MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPGFYGERRALLLIGAWRSPRWPGVGRALQRHPFSGLVDSAGELLHTP*

Sequence

>CNT30585809
CATGTGGTAACTTTTCTGACACATCTAGCTTCAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTCGTATTGGAAATCAGAATCA
AACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCA
AACTCCCCACCTGACAATGTCTTCCGCCCGGATCGGCCCGCTAGGCGGGCCTTGGGTCCAAAAGGAGGGGCCGGGCCCCGCCTCCGACTCACGGAATAAG
TAAAATAACGTTAAAAGTAGTGGTATTTCACTTCCGCCGGCGAACCGGCTCCCACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTC
AAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAA
TCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTC
ACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTGAGCATCCGCGGGGACCATCGCAATGCTTNGGAGGGGGCCATTCCCGGTCCGTCCCCCGG
CCGGCACGCGGTGACCCGCTCTCGTCGCGAGAGCAGTTCGAGCAGTCCGCCGACAGCCGACGGGTTCGGGGCCGGGACCCCCGTGCCCAGCCCTCAGAGC
CAATCCTTTTCCCGAAGTTACGGATCCGTTTTGCCGACTTCCCTTGCCTACATTGTTCCATGGGCCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTA
TGAGTACGACCGGGCGCGGGCGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACGCCGCGCGACGTGCGGCGCTCTTCCGACCGC
TGGACCCTACCTCCGGCTGAGCCGTTTCCAGGGTGGGCGGGCCGTTAAGCAGAAAAGATAACTCTTCCCGGGGCCCCCGCCGGCGTCTCCGGACTTCCTA
ACGTTGCCGTCCGCCGCCGCGTCCCGGCTCGGGAATTTTAACCCGATTCCCTTTCGGAGCTCGCGTGGAGACACGCTCTCGGACGGGCTTCCCCCGTCCC
TTAGGATCGGCTAACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGA
TCTGCACCGACGGCCGCTCCGCCCGGGCTCGCGCCCTGGGTTTTACGGCGAGCGCCGCGCCCTCCTACTCATCGGGGCTTGGCGCTCGCCCCGATGGCCG
GGTGTGGGTCGCGCGCTTCAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCCATGACCA
CCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGTGTCTGGGTTAGCGCGCAGTTGGGCACCGTAACCCGGCTTCCGGTTCATCCCGCATCGCCAGT
TCTGCTTACCAAAAATGGCCCACTTGGAGCTCTCGATTCCGCGACGCGGCTCAACGAAGCAGCCGCGCCGTCCTACCTATTTAAAGTTTGAGAATAGGTC
GAGGGCGTTGCGCCCCCGATGCCTCTAATCATTGGCTTTACCCGATAGAACTCGCACGTGGGCTCCAGCTATCCTGAGGGAAACTTCGGAGGGAACCAGC
TACTAGATGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTTCGGGCATAGTTCACCATCTTTCGGGTCC
CGACATGCATGCTCCAACTCGAACCCTTCACAGAAGATCGGGGTCGGCCGGCGGTGCAACCCCTCGAGAGGGTTCCCGCCCGTTAGCTTCCTTGTGCCTT
CCGGGTTTCCGCACC