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Detailed information on CNT30585745


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT000710, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30383337Musa acuminataTriticum turgidum94.667.0993.381103forward
CNT30595404Musa acuminataEragrostis curvula78.4794.2396.07915forward

Expression of CNT30585745

Peptides detected in this lncRNA

>peptide 1 (30 aa)
GRTGNGPLGGLPRASNSRLRTGTDKGNPTV*

>peptide 2 (32 aa)
GDGPGTAPSGAFPGHRTADSELVRTRGIRLFN*

>peptide 3 (55 aa)
MPCHLISDAHEWINEIPTVPVYYPAKPQPRERAWQNQRGKKTLLSLTLVRLCEMT*

>peptide 4 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGRISGERRPC*

>peptide 5 (46 aa)
GTDRERPPRGPSPGIEQPTQNWYGQGESDCLIKTKHCDGPPDAHAM*

Sequence

>CNT30585745
GGGGACGGACCGGGAACGGCCCCCTCGGGGGCCTTCCCCGGGCATCGAACAGCCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAA
ACAAAGCATTGCGATGGTCCCCCGGATGCTCACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACG
GCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTTGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTAC
TATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTT
GAGAGGTGTAGGATAAGTGGGAGCCGGTTCGCCGGCGGAAGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGAGTCGGAGGCGGGGCCCG
GCCTCTCGTTTTGGACCCAAGGCCTGCCTAGCGGGCCGATCCGAGCAGAAGACATTATCAAGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGAT
AACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAAAAGGGTAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACGAAC
CGTGAAAGCGTGGCCTATCGATCCTTTAGACCTTCGGAATTTGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGCGGCAGCCAAGCG
TTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAA
CGTGAGCTGGGTTAGTTTTACCCTACTGATGATCGTGCCGCGATAGTAATTCAACCTAGTACGAGAGGAACCGTTGATTCACACAATTGGTCATCGCGCT
TGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGTGTCGGATTATGACTGAACGCCTCTAAGTCAGAATCCTAGCTAGCAACCGGCGCTCTCGCCCGTCGT
TCGCCTCCCGACCCACAGTAGGGGCCTTCGGCCCCCATGGGCTCGTGTCGCCGGTGTAGCCCCCGC