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Detailed information on CNT30585318


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30295245Echinochloa crusgalliTriticum aestivum16.0733.7786.11180forward
CNT30137084Echinochloa crusgalliLolium perenne16.3461.6285.79183forward
CNT30683535Echinochloa crusgalliTriticum urartu14.7326.9285.45165forward

Expression of CNT30585318

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MMVSLSLPWSLGMMSCSTSISCSWSAAAAAAESTSSSATMVVM*

>peptide 2 (32 aa)
MAAAGIAAAAAAILFFSSTACLVGWNGRERTAS

>peptide 3 (37 aa)
MQTYQMWLFNQFLINATQSNGRHGQAKQQQENRILFL*

>peptide 4 (41 aa)
MINANISNVALQSIPNKRNAIEWKAWASKAAARKSYSISMN*

Sequence

>CNT30585318
GGTAATCATATAGCTAAAGCATTAATGGGATAATTTCTGTGTTGAAATTAAGGTCCCAACGTCCACAATCACGCACTCTTCCATCCTTGATTCCAGGGGC
AGACACACAGCATCACTATGGCATAGTATGTAGTACTGAAAGGAAGAACATACACACATATGCATACCACATGATAAATGCAAACATATCAAATGTGGCT
CTTCAATCAATTCCTAATAAACGCAACGCAATCGAATGGAAGGCATGGGCAAGCAAAGCAGCAGCAAGAAAATCGTATTCTATTTCTATGAACTGATCAT
CAAGTGACAACGTGGGCGTTCTTCGATCTCATCGGTGCGTAGTACCAAATAGAAGGCTAGGCTTGATTAGTAGTGGTGGTGTACAAATTGAAGCATGTCA
AATTGCTGCTGCTGCTTCTTGTTCTTGCGCAGCTGCTGGTAGGATGATGGTCTCCTTGTCGTTGCCGTGGTCCTTGGGGATGATGAGCTGCTCCACCTCC
ATCTCTTGTTCTTGGTCGGCGGCGGCGGCGGCGGCGGAATCAACATCGTCATCCGCCACCATGGTGGTGATGTAGTCGTCTTTGGCCGCCATGTAGTCTG
CTTTGTGGTCCGTCTCCTTCTCCTTGATCTTGCGGAGCTTGCGCTTGATGATGGAGGCGGCCATGTCGATGCTGGCGTAGGTGGACTCGGCGTCCTCCTC
GGCGCGGAGGACGCCGTGGCGCTTGCTGAAGAGGGTGATCTCGCAGCGGGAAGTCTTGGGGCCCCTGCTGAGCTCGCCGCCGCGGGCCGACAGCCGGACG
TCGACCTCGCGGACAAGGCGCACCGAGGAGAGCGGCCCATCCCACGCCATCCGCACCACGGCGGCGCCGGACACGCCTCCACCCTGCCGCCGCGCTGGCG
CCTCCACGGCCAGCGCGCGGCCCAGGAACCCCGACCGGAGGGCCCCCGAACCGCCTCCGCCTCCACACGACCTGCTGGGGCCGGGAGCCAGCGAGACGCG
AACGCCGCCACAGGCGGTGATGGCTGCGGCGGGAATTGCAGCTGCAGCGGCCGCCATTCTTTTCTTTTCTTCGACTGCCTGTCTCGTCGGATGGAATGGA
AGAGAGAGAACAGCTAGCTA