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Detailed information on CNT30584505


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG83|UBIQP_HORVU, E-value = 2e-64

BLAST vs NONCODE:
NONSTUT000620, E-value = 2e-30

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30345725Echinochloa crusgalliEragrostis tef60.8951.191.72302forward

Expression of CNT30584505

Peptides detected in this lncRNA

>peptide 1 (60 aa)
HLFIQQLNLSCCTATTVLGNTNELLVHETNHSFQHKRHRQINFKMMPLMAETRQPRNSSN*

>peptide 2 (53 aa)
MPSLSWILAFTLSMVSELSTSKVMVLPVRVFTKICIPPLRRSTRWRVLSFWML*

Sequence

>CNT30584505
CACTTATTCATTCAACAGCTCAACCTGTCCTGCTGCACCGCAACAACTGTTTTGGGGAACACAAATGAACTACTAGTTCATGAAACCAACCACAGTTTCC
AACACAAACGTCACAGACAGATAAACTTCAAGATGATGCCCTTAATGGCAGAGACCAGACAACCCAGGAACAGCAGCAACTAAAGCAGGTGGCTTACTGA
CCACCGCGGAGACGAAGCACCAGGTGGAGAGTGCTTTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTCCAGCTGTTTGCCAGCAAAGATCA
GACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCAGAGCTCTCAACCTCCAAGGTGATGGTCTTGCC
TGTCAGAGTCTTCACAAAGATCTGCATCCCACCCCTCAGGCGGAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCG