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Detailed information on CNT30584472


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30667627Echinochloa crusgalliTriticum dicoccoides12.0125.6888.1676forward

Expression of CNT30584472

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MASSTGGDGITLFVHHVLVIVHHVLLSRFKLFPSRSVTSDPLMLTMVSVALLAHRSRILG*

>peptide 2 (66 aa)
TKLLGLISRSTRPKGRGPDPRPDRGRPTQHWLEGPCHPALYKEVGSTGSRYELNLSRQNHRHTNPI*

Sequence

>CNT30584472
GACAAAGCTGTTAGGATTGATCTCCCGGTCCACACGGCCCAAAGGCCGTGGGCCTGATCCGCGCCCTGATCGGGGGCGCCCAACCCAACATTGGTTGGAG
GGCCCCTGTCACCCCGCGCTATATAAAGAGGTGGGCTCCACCGGCTCCAGATACGAGTTGAACCTGAGCCGCCAGAACCACCGACACACCAATCCGATCT
AGGGTTAGCGCGGGCAGTGACGGGAAGACCCACCACCGCCACCACGACGTCCTCCGTCGCCGTTCCAGGCCAAAGCCGGTGGCGACCAGAGGGACGGCGT
GATCTACGACCGCGACCGTCGACCCCTGCACTGCGCGTCGCTGCCTTGCGCAGATCATCACCGACAGAACCTGAGATGGCTTCCTCCACCGGAGGCGATG
GTATAACCCTATTCGTTCATCATGTTCTTGTTATTGTTCATCATGTTTTACTGTCAAGATTCAAGTTATTCCCTTCTAGATCTGTGACTAGTGATCCGTT
AATGCTAACAATGGTATCAGTCGCCTTACTAGCGCATAGATCTAGAATTTTGGGATAGAAATCAGACGAAAATGGATCCGAATCGGATCGAAAGAACCAA
CACAGAAATGCGTTCCTCATCGGACCGCACAGA