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Detailed information on CNT30583297


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 2e-96

BLAST vs NONCODE:
NONSTUT001005, E-value = 2e-45

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30191230Echinochloa crusgalliSecale cereale24.0951.5692.01463forward
CNT30397839Echinochloa crusgalliTriticum turgidum24.6636.0590.93474forward
CNT30668444Echinochloa crusgalliTriticum dicoccoides26.3372.791.9506forward
CNT3067718Echinochloa crusgalliLeersia perrieri25.2360.3290.93485forward
CNT30688478Echinochloa crusgalliTriticum urartu25.2926.1991.77486forward
CNT30107350Echinochloa crusgalliOryza longistaminata24.3554.2389.74468forward
CNT30576589Echinochloa crusgalliOryza barthii24.455.6392.11469forward

Expression of CNT30583297

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MMSPTGYNNPNNIETIPVYPIQRNIDKTTVYPIRRDKYHSLSYDLDSEEPIKNL*

>peptide 2 (33 aa)
MNLQQTTPSQSADLHIYPRNRQQIGRERIDYTA*

>peptide 3 (29 aa)
MHLHKKFRVHLFITLVQPNSKCSQTTRLT*

>peptide 4 (53 aa)
MPSLSWILAFTLSMVSEDSTSKVMVLPVRVLTKICIPPLSLSTRWRVDSFWIL*

>peptide 5 (47 aa)
PQDNMRFRNQQNALAQEVQGSLIHHISSTKQQMFTNHQTDIGLTSNM*

>peptide 6 (43 aa)
MNRNRKKTRNIYQKVIERAYLERIGRGCFAFASIARREVLRRIG

>peptide 7 (36 aa)
MVSEDSTSRVMVLPVRVFTKICICKHQGTKGRVKPP*

Sequence

>CNT30583297
CCACAAGACAACATGAGATTCAGAAATCAACAGAATGCACTTGCACAAGAAGTTCAGGGTTCACTTATTCATCACATTAGTTCAACCAAACAGCAAATGT
TCACAAACCACCAGACTGACATAGGACTCACATCGAACATGTAAACAAAACAACTTGACCAGGACACCAACCACAGGACAGGCAGACAATCTTCATTGGA
AAGACACAGGAGGCACCAGACTTTGTGAACCCAGGGATAACAGCAGCTCCATGGCCACTTACTGGCCACCACGGAGACGGAGCACCAGGTGGAGGGTAGA
CTCCTTCTGAATGTTGTAGTCCGCAAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC
TGGATCTTGGCCTTCACATTGTCGATGGTGTCAGAAGACTCCACCTCCAAGGTGATGGTCTTGCCCGTCAGGGTCTTGACAAAGATCTGCATACCACCCC
TGAGCCTGAGCACCAGGTGGAGAGTAGACTCCTTTTGGATATTGTAGTCCGCCAGGGTACGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGACGCTG
CTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTCACATTGTCGATGGTGTCAGAAGACTCCACCTCGAGGGTGATGGTCTTGCCAGTGAGG
GTCTTCACAAAGATCTGCATCTGCAAACATCAAGGGACAAAAGGAAGAGTCAAACCACCATAAACATTCAGCTATACAGGACACAGAACATGACAATAGT
GAAACTGATGAACTCTGAAGTCCGAACAGAAACTGATGAACTCTGAAGTTTGACAGAAGAGAATTAACATAATGAGCTGAATAAATTTGAAGCAAAAGAG
AATGAACATCTCACAGCTCATCATCCTATGTTAACAGAATATGCTAACTAAATCTGGAGGAAAATCTTATTAACAACCTATACATGATATAGAACATTGC
AACATTGAAACCAACCAATTCCGACTATTGAAACATGAAGCTATTAACTGAATAGAAAATCTAAATTTGAAGAAAATCTATATTGGGTACTAACTGAACG
GTTACATTTAACATTAAACTATCAAATTTTGACGACACATGATGTCGCCAACTGGATACAACAATCCAAACAACATTGAGACAATACCAGTTTATCCAAT
CCAGAGAAACATAGACAAAACCACAGTTTATCCTATCCGGAGAGACAAATACCACAGTTTATCCTATGATTTAGATAGTGAGGAACCAATTAAGAATCTG
TGAAGCCATATCTACATGAGCCCTTACCAGAACTGAACTAATTAATTCCACATGATAAAAAAAGCTACTTAATTCCACACCAATTCGGTGATCATCGCCA
GTCATGTATGATCAAAAGCCACCAATCTAGACAAGCTACCAAGATTAAACAGCAATCAAGCTGTATTCCTGTGCAGAGGACTACCTAGATTAATCGAACC
AACAATCCCTAACCCAAAAGAGATGAACCATCACACGATTCAACATATATAAAGCCTGACCCAATCATGTCCGGCTGCTCGATCACGCGCATGCCATAAA
AATCCCAACCCTAACAGCAAATCAGGCAACCATATCATACCGATCACGAATACGACGCCTCAGCATGAATCTACAGCAAACGACCCCATCACAATCCGCA
GATCTACACATCTACCCTAGGAATCGACAACAAATTGGACGCGAGCGCATCGATTACACAGCCTAATCGAAGCCTAAACGAGATCCACGATGAACAGGAA
CAGGAAAAAGACGCGAAACATATATCAGAAGGTGATCGAACGCGCATACCTTGAGAGGATCGGGAGAGGCTGCTTCGCTTTCGCTTCGATCGCTCGGAGA
GAAGTTCTTCGACGGATTGGGA