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Detailed information on CNT30583294


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 2e-96

BLAST vs NONCODE:
NONSTUT000620, E-value = 6e-46

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30441445Echinochloa crusgalliAegilops tauschii24.5962.991.03468forward
CNT30242408Echinochloa crusgalliAvena sativa24.4963.0692.06466forward
CNT30140683Echinochloa crusgalliLolium perenne24.4959.2992.06466forward
CNT30689164Echinochloa crusgalliTriticum urartu24.5959.6991.88468forward
CNT30722781Echinochloa crusgalliTriticum spelta24.4452.4291.61465forward
CNT30148033Echinochloa crusgalliBrachypodium distachyon24.1273.4490.63459forward
CNT30115854Echinochloa crusgalliOryza nivara24.5962.0790.17468forward

Expression of CNT30583294

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MNRNRKKTRNIYQKVIERAYLERIGRGCFAFASIARREVLR

>peptide 2 (43 aa)
MRFRNQQNALAQEVQGSLIHHISSTKQQMFTNHQTDIGLTSNM*

>peptide 3 (33 aa)
MNLQQTTPSQSADLHIYPRNRQQIGRERIDYTA*

>peptide 4 (36 aa)
MVSEDSTSRVMVLPVRVFTKICICKHQGTKGRVKPP*

>peptide 5 (54 aa)
MMSPTGYNNPNNIETIPVYPIQRNIDKTTVYPIRRDKYHSLSYDLDSEEPIKNL*

>peptide 6 (50 aa)
MPSLSWIFAFTLSMVSEDSTSKVMVLPVRVLTKICIPPLSLSTRWRVDSF*

>peptide 7 (29 aa)
MHLHKKFRVHLFITLVQPNSKCSQTTRLT*

Sequence

>CNT30583294
ACATGAGATTCAGAAATCAACAGAATGCACTTGCACAAGAAGTTCAGGGTTCACTTATTCATCACATTAGTTCAACCAAACAGCAAATGTTCACAAACCA
CCAGACTGACATAGGACTCACATCGAACATGTAAACAAAACAACTTGACCAGGACACCAACCACAGGACAGGCAGACAATCTTCATTGGAAAGACACAGG
AGGCACCAGACTTTGTGAACCCAGGGATAACAGCAGCTCCATGGCCACTTACTGGCCACCACGGAGACGGAGCACCAGGTGGAGGGTAGACTCCTTCTGG
ATGTTATAGTCTGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTCG
CCTTCACGTTGTCGATGGTGTCAGAAGACTCCACCTCCAAGGTGATGGTCTTGCCCGTCAGGGTCTTGACAAAGATCTGCATACCACCCCTGAGCCTGAG
CACCAGGTGGAGAGTGGACTCCTTCTGAATATTGTAGTCCGCCAAGGTACGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGG
GGAATGCCCTCCTTGTCCTGAATCTTGGCCTTCACATTGTCGATGGTGTCAGAAGACTCCACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAA
AGATCTGCATCTGCAAACATCAAGGGACAAAAGGAAGAGTCAAACCACCATAAACATTCAGCTATACAGGACACAGAACATGACAATAGTGAAACTGATG
AACTCTGAAGTCCGAACAGAAACTGATGAACTCTGAAGTTTGACAGAAGAGAATTAACATAATGAGCTGAATAAATTTGAAGCAAAAGAGAATGAACATC
TCACAGCTCATCATCCTATGTTAACAGAATATGCTAACTAAATCTGGAGGAAAATCTTATTAACAACCTATACATGATATAGAACATTGCAACATTGAAA
CCAACCAATTCCGACTATTGAAACATGAAGCTATTAACTGAATAGAAAATCTAAATTTGAAGAAAATCTATATTGGGTACTAACTGAACGGTTACATTTA
ACATTAAACTATCAAATTTTGACGACACATGATGTCGCCAACTGGATACAACAATCCAAACAACATTGAGACAATACCAGTTTATCCAATCCAGAGAAAC
ATAGACAAAACCACAGTTTATCCTATCCGGAGAGACAAATACCACAGTTTATCCTATGATTTAGATAGTGAGGAACCAATTAAGAATCTGTGAAGCCATA
TCTACATGAGCCCTTACCAGAACTGAACTAATTAATTCCACATGATAAAAAAAGCTACTTAATTCCACACCAATTCGGTGATCATCGCCAGTCATGTATG
ATCAAAAGCCACCAATCTAGACAAGCTACCAAGATTAAACAGCAATCAAGCTGTATTCCTGTGCAGAGGACTACCTAGATTAATCGAACCAACAATCCCT
AACCCAAAAGAGATGAACCATCACACGATTCAACATATATAAAGCCTGACCCAATCATGTCCGGCTGCTCGATCACGCGCATGCCATAAAAATCCCAACC
CTAACAGCAAATCAGGCAACCATATCATACCGATCACGAATACGACGCCTCAGCATGAATCTACAGCAAACGACCCCATCACAATCCGCAGATCTACACA
TCTACCCTAGGAATCGACAACAAATTGGACGCGAGCGCATCGATTACACAGCCTAATCGAAGCCTAAACGAGATCCACGATGAACAGGAACAGGAAAAAG
ACGCGAAACATATATCAGAAGGTGATCGAACGCGCATACCTTGAGAGGATCGGGAGAGGCTGCTTCGCTTTCGCTTCGATCGCTCGGAGAGAAGTTCTTC
GAC