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Detailed information on CNT30583253


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 2e-152

BLAST vs NONCODE:
NONMEST001181, E-value = 3e-122

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691368Echinochloa crusgalliOryza sativa32.8531.988.36696forward
CNT30672296Echinochloa crusgalliSetaria viridis34.5990.2790.18733forward
CNT30192628Echinochloa crusgalliSecale cereale32.5656.1991.74690forward
CNT30400381Echinochloa crusgalliTriticum turgidum22.1358.6391.9469forward
CNT30141870Echinochloa crusgalliLolium perenne32.7571.1190.92694forward
CNT30685413Echinochloa crusgalliTriticum urartu34.0338.4589.46721forward
CNT30338865Echinochloa crusgalliEragrostis tef32.4755.5386.92688forward
CNT30595771Echinochloa crusgalliOryza meridionalis32.8565.8588.79696forward
CNT30148670Echinochloa crusgalliBrachypodium distachyon32.8573.4289.22696forward
CNT30593848Echinochloa crusgalliEragrostis curvula32.6177.4790.45691forward

Expression of CNT30583253

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MNLQQTTPSQSADLHIYPRNRQQIGRERIDYTA*

>peptide 2 (33 aa)
EINRMHLHKKFRVHLFITLVQPNSKCSQTTRLT*

>peptide 3 (36 aa)
MVSEDSTSRVMVLPVRVFTKICICKHQGTKGRVKPP*

>peptide 4 (50 aa)
MPSLSWIFAFTLSMVSEDSTSRVIVLPVRVFTKICIPPLSLSTRWRVDSF*

>peptide 5 (53 aa)
MPSLSWIFAFTLSMVSEDSTSKVMVLPVRVLTKICIPPRRRSTRWRVDSFWIL*

>peptide 6 (39 aa)
NQQNALAQEVQGSLIHHISSTKQQMFTNHQTDIGLTSNM*

>peptide 7 (40 aa)
MNRNRKKTRNIYQKVIERAYLERIGRGCFAFASIARREVLR

>peptide 8 (54 aa)
MMSPTGYNNPNNIETIPVYPIQRNIDKTTVYPIRRDKYHSLSYDLDSEEPIKNL*

Sequence

>CNT30583253
GAAATCAACAGAATGCACTTGCACAAGAAGTTCAGGGTTCACTTATTCATCACATTAGTTCAACCAAACAGCAAATGTTCACAAACCACCAGACTGACAT
AGGACTCACATCGAACATGTAAACAAAACAACTTGACCAGGACACCAACCACAGGACAGGCAGACAATCTTCATTGGAAAGACACAGGAGGCACCAGACT
TTGTGAACCCAGGGATAACAGCAGCTCCATGGCCACTTACTGGCCACCACGGAGACGGAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTATAGTCT
GCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGT
CGATGGTGTCAGAAGACTCCACCTCCAAGGTGATGGTCTTGCCAGTGAGAGTCTTGACAAAAATCTGCATACCACCACGCAGGCGGAGCACCAGGTGGAG
AGTAGACTCCTTTTGGATATTGTAGTCCGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCC
TTGTCCTGGATCTTCGCCTTCACATTGTCAATGGTGTCAGAAGACTCAACCTCTAGAGTGATTGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATAC
CACCCCTGAGCCTAAGCACCAGGTGGAGAGTGGACTCCTTCTGAATATTGTAGTCCGCCAAGGTACGGCCATCCTCCAGCTGCTTGCCAGCAAAGATCAG
ACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTCACATTGTCGATGGTGTCAGAAGACTCCACCTCGAGGGTGATGGTCTTGCCA
GTGAGGGTCTTCACAAAGATCTGCATCTGCAAACATCAAGGGACAAAAGGAAGAGTCAAACCACCATAAACATTCAGCTATACAGGACACAGAACATGAC
AATAGTGAAACTGATGAACTCTGAAGTCCGAACAGAAACTGATGAACTCTGAAGTTTGACAGAAGAGAATTAACATAATGAGCTGAATAAATTTGAAGCA
AAAGAGAATGAACATCTCACAGCTCATCATCCTATGTTAACAGAATATGCTAACTAAATCTGGAGGAAAATCTTATTAACAACCTATACATGATATAGAA
CATTGCAACATTGAAACCAACCAATTCCGACTATTGAAACATGAAGCTATTAACTGAATAGAAAATCTAAATTTGAAGAAAATCTATATTGGGTACTAAC
TGAACGGTTACATTTAACATTAAACTATCAAATTTTGACGACACATGATGTCGCCAACTGGATACAACAATCCAAACAACATTGAGACAATACCAGTTTA
TCCAATCCAGAGAAACATAGACAAAACCACAGTTTATCCTATCCGGAGAGACAAATACCACAGTTTATCCTATGATTTAGATAGTGAGGAACCAATTAAG
AATCTGTGAAGCCATATCTACATGAGCCCTTACCAGAACTGAACTAATTAATTCCACATGATAAAAAAAGCTACTTAATTCCACACCAATTCGGTGATCA
TCGCCAGTCATGTATGATCAAAAGCCACCAATCTAGACAAGCTACCAAGATTAAACAGCAATCAAGCTGTATTCCTGTGCAGAGGACTACCTAGATTAAT
CGAACCAACAATCCCTAACCCAAAAGAGATGAACCATCACACGATTCAACATATATAAAGCCTGACCCAATCATGTCCGGCTGCTCGATCACGCGCATGC
CATAAAAATCCCAACCCTAACAGCAAATCAGGCAACCATATCATACCGATCACGAATACGACGCCTCAGCATGAATCTACAGCAAACGACCCCATCACAA
TCCGCAGATCTACACATCTACCCTAGGAATCGACAACAAATTGGACGCGAGCGCATCGATTACACAGCCTAATCGAAGCCTAAACGAGATCCACGATGAA
CAGGAACAGGAAAAAGACGCGAAACATATATCAGAAGGTGATCGAACGCGCATACCTTGAGAGGATCGGGAGAGGCTGCTTCGCTTTCGCTTCGATCGCT
CGGAGAGAAGTTCTTCGAC