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Detailed information on CNT30582394


BLAST search results

BLAST vs Swiss-Prot:
sp|P23993|PSAL_HORVU, E-value = 2e-38

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673293Echinochloa crusgalliSetaria viridis99.4674.892.99371forward
CNT30520774Echinochloa crusgalliSetaria italica97.8632.4491.23365forward
CNT30639966Echinochloa crusgalliNymphaea colorata40.4810.0686.09151forward
CNT30516978Echinochloa crusgalliJuglans regia23.0612.6187.2186forward
CNT30376279Echinochloa crusgalliArabidopsis thaliana27.0816.9583.17101forward
CNT3021623Echinochloa crusgalliCitrullus lanatus30.038.2584.82112forward
CNT30730016Echinochloa crusgalliCorchorus capsularis21.4512.088580forward
CNT30710020Echinochloa crusgalliGlycine max31.925.9384.03119forward
CNT3042792Echinochloa crusgalliPrunus dulcis19.8420.0585.1474forward
CNT30182270Echinochloa crusgalliSecale cereale44.2429.8990.3165forward
CNT30564216Echinochloa crusgalliActinidia chinensis37.5362.7886.43140forward
CNT3084834Echinochloa crusgalliVigna radiata20.642088.3177forward
CNT30437582Echinochloa crusgalliAegilops tauschii31.135.1591.38116forward
CNT30454500Echinochloa crusgalliSaccharum spontaneum46.9248.3494.86175forward
CNT30135064Echinochloa crusgalliLolium perenne47.453189.83177forward
CNT304795Echinochloa crusgalliZea mays87.472.1289.26326forward
CNT30720963Echinochloa crusgalliTriticum spelta37.2724.9692.09139forward
CNT30344813Echinochloa crusgalliEragrostis tef47.7234.0392.13178forward
CNT30620323Echinochloa crusgalliCajanus cajan31.16.4982.76116forward
CNT30597198Echinochloa crusgalliOryza meridionalis27.087.5494.06101forward
CNT30154501Echinochloa crusgalliPrunus persica37.2744.5579.86139forward
CNT30570425Echinochloa crusgalliVitis vinifera29.766.3985.59111forward
CNT3027985Echinochloa crusgalliTheobroma cacao37.5325.7884.29140forward
CNT30319122Echinochloa crusgalliAsparagus officinalis45.5811.4985.29170forward
CNT3037519Echinochloa crusgalliCucumis melo21.987.9387.882forward
CNT30578384Echinochloa crusgalliOryza barthii37.2735.4694.96139forward
CNT30604850Echinochloa crusgalliOryza punctata23.068.8696.5186forward
CNT30551896Echinochloa crusgalliOryza brachyantha45.8425.7991.81171forward
CNT30112090Echinochloa crusgalliFicus carica37.536.8485140forward
CNT3040359Echinochloa crusgalliMarchantia polymorpha29.4914.6983.64110forward

Expression of CNT30582394

Peptides detected in this lncRNA

>peptide 1 (97 aa)
MDRLLEEVREVEHVEEEVCPEHAGDSAEEESSGELGPAVGGLQLVGLLLAARERERGRRGGRRARRGGSRARGPPRCPGAAGSRRCGRPAGWRGTRR*

Sequence

>CNT30582394
ACATGGATCGTCTACTTGAAGAAGTACGGGAGGTCGAGCACGTAGAGGAGGAAGTATGCCCAGAGCACGCCGGAGATTCCGCCGAAGAAGAATCCTCCGG
TGAACTTGGCCCAGCCGTCGGCGGTCTGCAGCTTGTCGGCCTCCTTCTTGCGGCCCGTGAGCGTGAGCGTGGGCGCCGTGGAGGGCGAAGGGCCCGACGA
GGAGGTAGCCGTGCGCGAGGCCCACCTCGATGCCCCGGAGCAGCGGGCTCACGGCGGTGCGGTAGGCCGGCAGGTTGGAGAGGTACCAGGCGATGAGCGG
GCTGGAGGTGATGGGCGTCTCCAGGCTGCCGATGAAGGGGTCGCCGTTGATGGGCTGCACCACCTGGTACGTT