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Detailed information on CNT30582073


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30297329Echinochloa crusgalliTriticum aestivum1857.0888.72133forward

Expression of CNT30582073

Peptides detected in this lncRNA

>peptide 1 (61 aa)
SQVPKFVYNNMQNFVVTKSTGHIKICLLDFVGKIQREADRQSSHNSSKPCKNTVTRFHIFT*

>peptide 2 (48 aa)
MPSLASAASPSLLYLPSCARELALARSSSASCAALTFSGRPAHVLRQA*

Sequence

>CNT30582073
ATCCCAGGTACCAAAATTTGTGTATAATAATATGCAAAACTTTGTAGTAACCAAATCCACAGGCCACATAAAGATTTGTCTGCTCGACTTTGTCGGTAAA
ATACAGAGAGAGGCAGATCGACAAAGCTCACACAACTCTAGCAAACCATGCAAAAATACAGTAACCCGATTCCATATTTTCACTTAGGATAGTAATTAAA
ACTGCATGCAGTGTGTACCATCTAAACCTGTAATGGCACACTGCCTACGGTGCCCTCGAGGTTGGTACTAGCAGCGAGCTTAGTATCATCATCATCGTCT
TAATAGACGTAGTACGATCTTGACGAACAATCATGCCCTCGATCATTGGCCGTACGTCTTAGTAGACGTAGTTCTTGACGAACATGCCCTCATTGGCCTC
GGCGGCCTCGCCGTCGCTGCTGTACTTGCCGAGCTGCGCCAGGGAGTTGGCCTTGGCACGCAGCAGCAGCGCGTCCTGCGCCGCCTTGACGTTCTCCGGC
CGGCCGGCCCATGTCTTGAGGCAGGCGTGACCATGCTGGGCTTGAGGAGGATGCCCTCAAACATCACATTGTTCTCAGCCATGTAGAAGAAGGTCCTCTC
GATGTCGTGCTCGCCGTCGAGAAGGATTTCAGGCTCCACAATCGGCACAAGACCGTTGTCCTAGCATAGCGTATCCACAGATAAGATGTTTATACACATG
CATGTTGAAAGGAAAACAAAATGGTGAGATATACTCCGT