Detailed information on CNT3058165


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678565Amborella trichopodaSetaria viridis23.326.4388.1459reverse complement
CNT3095993Amborella trichopodaSolanum tuberosum37.942.488.5496reverse complement
CNT30301056Amborella trichopodaTriticum aestivum42.298.0785.05107reverse complement
CNT30621081Amborella trichopodaCajanus cajan30.437.3884.4277reverse complement

Expression of CNT3058165

Peptides detected in this lncRNA

>peptide 1 (57 aa)
ILSEGCNARGISKMIRDPGPDLMKHLIGNFKLNKNKIWGEVIQKKLHLVLLVLSRRG*

Sequence

>CNT3058165
CATCCTTTCGGAAGGTTGCAACGCGCGAGGTATTTCCAAAATGATACGAGACCCGGGACCTGACCTAATGAAGCATCTTATCGGGAACTTCAAATTAAAT
AAAAATAAGATATGGGGTGAAGTGATACAAAAAAAACTCCATTTGGTTTTGTTAGTCCTATCTAGAAGAGGATAGTATATTAAAAATGTAACCGACTCTT
TCGTTTCCTTGAGCCACTGACCATCTGCCGGAAGTTTCGGATTTAATACCGAT