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Detailed information on CNT30581406


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LUV4|FRL4A_ARATH, E-value = 8e-19

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672118Echinochloa crusgalliSetaria viridis99.5858.1792.98470forward
CNT30520218Echinochloa crusgalliSetaria italica99.5852.1193.19470forward

Expression of CNT30581406

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MLPFSSRSWPSPVLRAASGDPPVETQLPAYGPQHTL*

>peptide 2 (63 aa)
AHGWGGVWHRNADIYAGYFFSRVNIWLSEGRWAPVAVYMTNRPVIRVRGGGGVRGVGRGSGGI*

Sequence

>CNT30581406
GCTCATGGGTGGGGTGGAGTATGGCATCGCAATGCCGACATTTACGCTGGCTACTTCTTCAGCAGGGTAAACATATGGCTCTCTGAAGGCCGGTGGGCTC
CGGTTGCAGTATACATGACCAACCGGCCTGTCATAAGGGTAAGGGGAGGCGGTGGCGTACGAGGTGTGGGAAGGGGAAGTGGTGGCATATGAGGTGTGGG
AAGGAGAGCAGGCAAATGTGGTGGGAGCTGGGAAAGAAGACACAGACGTGTTGTTAGTTCGACCTGCCTTGGCAAGAGGCATTGGGCCTCCATTGCTTGC
ACGGATACGCTTGGTTGCAGGGCCACTGCTGCCGCCACTAGAAGCACTTGATGCTGCCTTTTTCTTCTCGGTCTTGGCCTTCTCCAGTTCTTCGAGCTGC
TTCCGGAGATCCTCCAGTGGAAACTCAGCTTCCAGCTTACGGTCCTCAACACACTTTATAACTGCTCTCAGC