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Detailed information on CNT30581346


BLAST search results

BLAST vs Swiss-Prot:
sp|Q07473|CB4A_ARATH, E-value = 5e-62

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520570Echinochloa crusgalliSetaria italica50.2531.1995.08305forward
CNT30640553Echinochloa crusgalliNymphaea colorata47.7836.0285.17290forward
CNT30513329Echinochloa crusgalliJuglans regia40.238.0181.15244forward
CNT30289853Echinochloa crusgalliTriticum aestivum47.613793.43289forward
CNT30243799Echinochloa crusgalliAvena sativa49.4246.892.33300forward
CNT30659938Echinochloa crusgalliTriticum dicoccoides38.5543.6693.16234forward
CNT30452520Echinochloa crusgalliSaccharum spontaneum50.2520.3593.77305forward
CNT30680853Echinochloa crusgalliTriticum urartu50.4154.8493.79306forward
CNT30620949Echinochloa crusgalliCajanus cajan40.6922.9680.97247forward
CNT30551395Echinochloa crusgalliOryza brachyantha47.9433.694.5291forward

Expression of CNT30581346

Peptides detected in this lncRNA

>peptide 1 (67 aa)
NHGSSPQDDRCTSECIDSSLVHILQMTKSQALLINATSINKGLDRIHHLPIPSHSSSQNDTVPSISS*

>peptide 2 (65 aa)
MDIWAGLKRILRRCVAQLLSGPLPVAAACTAKPRKATMARRACLISASCSRSFFSGSDASPSGSK*

Sequence

>CNT30581346
TTAACCATGGTTCATCGCCTCAAGACGATAGATGTACAAGTGAATGCATTGATTCATCACTGGTTCATATATTACAAATGACCAAGTCCCAAGCTCTCCT
AATTAACGCGACCTCCATTAACAAAGGACTAGATCGGATCCACCATCTTCCCATACCCTCTCACTCGTCATCACAAAATGATACAGTACCATCCATCTCC
AGCTGATGATAGAGATCACGGTTAATTAATTCAAGAACATCACGTTTCGGACGTACGGATCGACGCATGGATATATGGGCCGGGCTTAAGAGGATCCTCC
GAAGGTGCGTGGCCCAGTTGTTGAGCGGGCCCTTGCCGGTGGCGGCGGCCTGCACGGCGAAGCCGAGGAAGGCGACCATGGCGAGGCGCGCGTGCTTGAT
CTCCGCCAGCTGCAGCCGCTCCTTCTTCTCCGGGTCCGACGCCAGCCCCAGCGGGTCGAAGTAGGACCCGCCCGGGTACAGCCTCTTCTCCGGGTCCAGC
TCCGCGTTGCGCTGGAACTCGATGTACCCGATCACCAGCACCTCGATCCAGATCAGCGTCGAGATCGAGAAGGGCAGCGGCTGCCCCAGGTACGACGACC
CGTCCAC