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Detailed information on CNT30581253


BLAST search results

BLAST vs Swiss-Prot:
sp|P15192|CB22_PINSY, E-value = 1e-06

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672091Echinochloa crusgalliSetaria viridis32.445.591.37197forward
CNT30436081Echinochloa crusgalliAegilops tauschii47.5356.5691289forward
CNT30243897Echinochloa crusgalliAvena sativa50.6668.690.91308forward
CNT30659570Echinochloa crusgalliTriticum dicoccoides50.9956.5790.65310forward
CNT30102749Echinochloa crusgalliOryza rufipogon49.5143.3792.03301forward

Expression of CNT30581253

Peptides detected in this lncRNA

>peptide 1 (67 aa)
NHGSSPQDDRCTSECIDSSLVHILQMTKSQALLINATSINKGLDRIHHLPIPSHSSSQNDTVPSISS*

Sequence

>CNT30581253
TTAACCATGGTTCATCGCCTCAAGACGATAGATGTACAAGTGAATGCATTGATTCATCACTGGTTCATATATTACAAATGACCAAGTCCCAAGCTCTCCT
AATTAACGCGACCTCCATTAACAAAGGACTAGATCGGATCCACCATCTTCCCATACCCTCTCACTCGTCATCACAAAATGATACAGTACCATCCATCTCC
AGCTGATGATAGAGATCACGGTTAATTAATTCAAGAACATCACGTTTCGGACGTACGGATCGACGCATGGATATATGGGCCGGGCTTAAGAGGATCCTCC
GAAGGTGTCGAAGATGGTGGTGTGGAGCGGGTCGCTGAGGTGCGTGGCCCAGTTGTTGAGCGGGCCCTTGCCGGTGGCGGCGGCCTGCGCGCGTGCTTGA
TCTCCGCCAGCTGCAGCCGCTCCTTCTTCTCCGGGTCCGACGCCAGCCCCAGCGGGTCGAAGTAGGACCCGCCCGGGTACAGCCTCTTCTCCGGGTCCAG
CTCCGCGTTGCGCTGGAACTCGATGTACCCGATCACCAGCACCTCGATCCAGATCAGCGTCGAGATCGAGAAGGGCAGCGGCTGCCCCAGGTACGACGAC
CCGTCCAC