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Detailed information on CNT30580750


BLAST search results

BLAST vs Swiss-Prot:
sp|O65665|ERF60_ARATH, E-value = 2e-32

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520507Echinochloa crusgalliSetaria italica19.2530.7898350forward
CNT30251780Echinochloa crusgalliAvena sativa11.7238.5990.61213forward
CNT30450155Echinochloa crusgalliSaccharum spontaneum28.7724.8392.73523forward
CNT30228530Echinochloa crusgalliAnanas comosus9.9622.1390.06181forward

Expression of CNT30580750

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MRRCSGRAAGAWRRRRRGEGRGRRRCRGS*

>peptide 2 (32 aa)
MALVVDLHETLLAQGRCGKRTPLGDQTSNLDC*

>peptide 3 (36 aa)
MFWQSCWSLASTEAWRGPREAALSGKLRRAASPRRR*

>peptide 4 (45 aa)
MGWARGPSTEDCAWRCRWRRAWMYWIWAGLSWPAQSAAAAYGYAP*

Sequence

>CNT30580750
ACAAATTGGGAGACCAATCACAGTTTTTTACAAGATAATATAGCACTGACAATATAGTAGTTCATCAGATTACAACTTCTCGACACAACTACTCCTGATT
TTACATCATACAACAATATCACATCACTCCGCTGTTCATACAACCTGTAGAGCAGCAGGAGCAGCAACACCCTACCGAGAAACAAAGCTACCAGAACAAT
GGACACCTGACCGGCCTGAGTCACTGACCAATGACCGACCGACCACACCGGAGACGCCGGACACAAAAACGCCGGCTTCCCATCGGTTGGTTCTCTCCTC
CGGGAACCAAACCCTAACAGAGATCTACAATTGACTGACCATGAACACCAAAACGAATTCTGAAACATCTACACAAAACGAACGGGATTAGATCTAATAA
TCCACCAGTGCCCGCGCAGGATGTAAAAAATCCCATCTGCGCGACGGCCGTTAAGCCTCTGCTGCTTCTGTAGTAGAAGGAGCCAAGAAGAAATGGAAGG
CAGTGGTTAATTGGCGGCGAGGAGGGAGTCCCAGTCGATCTCGTACGACGGGTACTTGGTGAGCGCGAAGCCGGCGGCCTCGTCCCACGGCAGGACGAGG
ACGCGTCGTCGGAGGACGGCGAGGAGCAGTTGCTGGTGGGGGCGGAGGAGGACGTGGTGGCAGCAGCTGCGGCAGACTTCTTGGCGCCCTTCTTGGATGC
GGCGATGTTCTGGCAGAGCTGCTGGAGCTTGGCGTCGACGGAGGCGTGGAGAGGGCCGCGGGAGGCGGCGTTGTCGGGGAAGTTGAGGCGCGCCGCGTCG
CCGCGGAGGCGGTAGGCGGCCTGGTCGTAGGCGAGCGCCGCCTCCTCGGCGGTGTCGAAGGTGCCGAGCCAGAGGCGGGTGCGGTTGCGCGGGAGGCGGA
TCTCCGCTACCCACTTGCCCCAGTGCCGCTGCCGCACGCCGCGGTACAGCTTCTGCGGCCGCGGCGGGGTGGGGGCCGCCGCGGACGCCGACGAGACCTT
CATGGGCTGGGCCCGCGGGCCCAGCACAGAGGACTGCGCCTGGCGCTGCAGGTGGAGGCGGGCCTGGATGTACTGGATCTGGGCCGGGCTCAGCTGGCCC
GCACAGTCGGCGGCGGCGGCGTACGGGTACGCGCCGTAGGCGGCAGCGGCGGCGGAGGCGTGGTGGAAGGAGAAGGGCGAGGTGGGGCTGTGAGGGTGCT
GTTGTTGGAGAAACGGACTAGATTCGTGAGGAGCAGAGGCATCCCGGATAAAAGGCTCGAGTGCTCTCATCAGCTCCTCCCCGGACACATCTGTAGTAGT
AGCCATCTGACTATAGAAAGATCTGAACAAAAACTCTCTTTTTTTGTTTTTTTTCTCTAGCAAACCAAGAACAAATCAGGCAGAACCCAACAGCCACAGT
AAAAAACAGATGGCTCTGGTGGTAGATCTGCACGAGACCTTACTTGCACAAGGGAGGTGTGGAAAAAGAACCCCTCTTGGCGACCAAACTAGCAACCTAG
ACTGCTAAAAAAAGACCCAAACAGAAGAAGAAACAGCAGATCTGAAGCCCCGGGGTCTAAAACGCCCCGGGTCTTTCGCTGTCTGCTCGAGGAAGGCGAA
AACGAAACCAAGAAAATCGAAAGGGCGAGGAGGAAGGAGGGCTGAGAGAGAAAACTTTACCTGTTTCGCGCGAGGACTCGCTCAGATCTAAGCTTACCTC
GCTCGAGCTCACTTTGAACGGTGGTGGGTGGGCGCTGGCGGTCGGAGGCGGATTGGGCTGTGGGCGAGTGGAGGGAGATGGGATGACTGGTGGTCTGTGG
AGTGTTGGTGGGGCGGGG