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Detailed information on CNT30580577


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30142107Echinochloa crusgalliLolium perenne21.1917.8188.24153forward

Expression of CNT30580577

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MVTRPEVVALAQNGSRPDRDDGASRLGTPTALQLRSPLDDAIAIASSSRWR*

Sequence

>CNT30580577
CTTGAGTTTTTGCATGTTAAAACATGTGTAAATTTAGTTGAATATAATTTTAACCCGTAGCAATGCACGGGCATACACTTAACTAGTTTTAATAATAATT
AAGCTTTACATTACAAGGAGTTTCCGGCCGGAAAGTCGCCGGCGTTCGTTGTACAGTTCCTGCACGCTCGCAGGCAGTGCCTAGTCATCAACCAATCACA
CATAAAACACCATCCACACTCCCAGCGCACGGTTCATACCGTCCAGTCCCGTCTCATCTCTCTTCTTGTCTTCTCACAATAATCGTCTCAGCTCAAGGGT
AGATCGTTCTGGGGATGATGATGTCGCCGATGTTGTTGTGCCACGGGTCGGCGAGCATGGCCCAGCGGCAGTGGTAGACCTCGGACTCCTTGAACCGCTC
GAAGTTCTCCGGCACGGTGGCCAGGCCCAGGGGCCGTCGAGGTGGGCAGGGCGGGGCTGGCCGGGCATCCACTCGGCGGACATGGTGACGCGGCCGGAGG
TGGTGGCGTTGGCGCAGAACGGCAGCCGGCCGGACCGGGACGACGGCGCCAGCAGGCTGGGCACGCCCACGGCGCTGCAGCTCCGGAGCCCGCTCGACGA
CGCCATCGCCATTGCTTCCTCCTCCCGGTGGCGCTGATCCGATCCTGAGACAAGACGAGCTACAACAAGACGAGCTACAGCAAGTGGCGTTTGAGAGAGG
AGCAGAATCTGCGGCTGCTATT