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Detailed information on CNT30580134


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30546130Echinochloa crusgalliIpomoea triloba28.6158.3382.35119forward
CNT30370487Echinochloa crusgalliOryza glumipatula34.6215.0690.97144forward
CNT30576846Echinochloa crusgalliOryza barthii34.6239.4590.97144forward

Expression of CNT30580134

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MVLGMMMSPMLLCHGSARWVARFSSGPVPGYADCCTQNPTNASIARRP

Sequence

>CNT30580134
ATTTTGTTTGTTTAAGTCGACTTGAGTTTTTGCATGTTAAAACATGTGTAAATTTAGTTAAATATAATTTAACGTACCCGTAGCAACACACGGGTATTTA
CCTAGTTTTAATAATAAGCTTTACATTACAAGGGGTTTCCGGCCGGAAAGTCACCGGCGTTCGTTGTACAGTTCCTGCACGCTCGCAGCGCACGGTTCAT
ACCGTCCAGTCCCGTCTCATCTCCCTTCGATCTTCTCTCACAATAATCGTCTCGATCAGCTCAAGGGGAGATGGTTCTGGGGATGATGATGTCGCCGATG
TTGTTGTGCCACGGGTCGGCGAGGTGGGTAGCCAGGTTCTCCAGCGGCCCGGTGCCCGGGTACGCCGACTGCTGCACGCAGAACCCCACGAACGCCAGCA
TCGCAAGACGGCCTGC