Detailed information on CNT30580115


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6AVI0|RSLE2_ORYSJ, E-value = 0.0

BLAST vs NONCODE:
NONORUT003941, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30229173Echinochloa crusgalliAnanas comosus24.0421.0179.67610forward

Expression of CNT30580115

Peptides detected in this lncRNA

>peptide 1 (91 aa)
MRLPVPAENMELPLLTMDIGMAKISRAILDRVGNLTVFSFHQFRISNSWIRGVRDSSRYCSSSDFEGWLLLISERYISKSRSPSPVEAGAP*

>peptide 2 (42 aa)
MTTAMARTRLQSFQYLSNLSCISLAMLLKMGSLCPVPFVSSS*

>peptide 3 (39 aa)
MHSIIDHLNILRSLSPIDFGVTKLDKLHLKTWIHDNCNG*

>peptide 4 (36 aa)
MSCEEHSLSSVMVNSLSFIFQSERLMLIASLSAFSE*

>peptide 5 (34 aa)
MSLHQIIILGQLITLPQFFTWGQLVTLIQFFILD*

Sequence

>CNT30580115
GCCTGATACATACCAGAAGTCCAGAACCACTCATTCTCTAATGACATATCCAAGCTAAGGAATTAAGCTGCTCTTTCTCTGCAATTTCATTCACAGCCCA
ATCCCAATTCATACAGCAGATACAAATTACAGCAGCGAACAAGTTAAACAGAGTTCAACATAAACAAGTCACAACTCTACAAGATAAATACCAGAACAGA
TCACAATCAGTTCACAATCTCAGCCTACATTACACCTACAGTTCAATAAACTCATAGAAACGATAGATAATAGATTCATGTCAGCGAGCCTATGATCATT
CAGCCTTGACCAGTGCAGAACTTGGCGCCTCGCTGGCAGCAGGTGAGTACTGGAGCCAGTCTTTTGCACAGACAAGTGCCTCCACAATCTCAGGACGAAG
AGAGCTTCTGTAGTCATCGAGCATGCGACTTCCAGTTCCAGCAGAGAATATGGAGCTGCCACTGCTTACCATGGACATTGGAATGGCCAAGATATCACGG
GCCATTTTAGACAGGGTTGGAAACTTGACTGTGTTCAGCTTCCACCAGTTCAGAATATCAAACTCCTGGATCCGTGGAGTGAGAGATTCATCCAGGTACT
GTTCCAGTTCAGATTTTGAGGGCTGGCTACTCTTGATCTCAGAAAGGTACATATCAAAATCTAGAAGCCCATCACCAGTGGAAGCAGGAGCTCCTTGACC
GTTATTCTCATTGGCCGGCCCATTATTCCCTTCACCTTGCTCAATGTAGGCTGGGGTCAATGGGAGTGGCTGAGCCACATACTCCTTATACAGCTCATGC
ACAGCATCATTGACCACCTTAACATACTTCGCAGCCTCAGCCCCATAGATTTTGGAGTAACTAAACTCGACAAGCTTCATCTTAAAACGTGGATCCATGA
CAACTGCAATGGCTAGAACAAGGCTGCAATCTTTCCAGTACTTGTCAAACCTCTCATGCATATCCTTGGCCATGCTACTGAAAATGGGATCTTTATGTCC
TGTGCCATTTGTTAGTTCTAGCTGAAGTTTCCAGGCTTCGTGGAAGAAAAGGTTTGATGTTGGGTTTGCTGCTGCCATGATGCTATGTGCAGAGTCATAT
AGCAGTTTCAGGTAAGTACAAGCAGCCTCAACTTTCTTCCAATCCTCTGCTGAAGGAGCTTCATTGTAGTTATCATCACACGTCTCCAGTTGAGTGAAAG
CTTCCTTATAATCCAAGGCAGCCAGCAACATCAGATAAGTTGTGTTCCACTGGGTTGTGACATCCAGACAGAGGGTCTTTGTACTGGGAATCTCCAGCTG
CAGAGCAATCTCAGCAAACTTCTCTTCACGGGCAGACGAAGCCTTTATGAATTTTATGCTTTCACGGATATTGTAGATCACACCGTGAATTGAAGCAATG
ACATCTTGTGCAACTGCATTAAGGATATGAGCATAGCACCTCACGACAAATAGCTGTCCCTTCAGCATGAGATTGTTCTTGTTGGAGAGATGATCCCTCA
AATTTGCACTGTAGATGTCATGTGAGGAGCATTCATTATCCAGTGTGATGGTGAACAGCTTGTCCTTCATATTCCAGTCAGAAAGGCTCATGCTAATTGC
TTCACTAAGTGCATTCTCTGAATGAGGAGAAGATACCATCATGAAGCTAAGCATTCTTCGGTGTACTTTCCACTCGGAGTCGATAAACTGCCCTGCAAGT
GAAACATAGCCAAGAGTCTGACTTGTTGTCCACAATCCTATAGTGAGGCTGATCCTTCCAGGCATAGTGTTGAATGCTTGTATCAGGTTCTCTTTTTCTT
TCTGATAAACAGCATACACCTCTCCCTCCATTGTTTCAACATCCACAATCTTGAAACGTGGCTGCATACTCTCAATAAAAGTGGCAAATGCCGGCTGTTG
AACAATGTGAAGCGGGTAGTCATGCTGAATGATCATCTTTGCCAGGTATGAACAACTGCGGTCTTGATCAAAAGCAGCATTTGCATAACCAGTATATCTG
TAGCGTCTCTTGGTAGGCCGTTCCACACTTCCCTCACCATCATTGTCAGTACCACCAGCTGAAGGCAGTGCCAGTCTCTGCTCTTGACTCTTTATCATAG
GACACGAACCCAAGGTGATGTGCCTCTTGAGATGGCTAGTCCCAGCAATCTTTGAGCCAGAACTATAAGCAAATGTTTGCTTACAGAGCTTGCAACACGC
CCTTGTGGCCCCTCCAGCAACAGCTTCAATAGTGAAGTGCTCCCATACCAAGGACTTCTTTCTCCTCCGTCTAATTCCGGTCCGAGGGGTCGTTTCCTCA
GCAACTACCAATTCATGTCCTTGCACCAAATCATCATTTTGGGCCAACTCATTACCTTGCCCCAGTTCTTCACCTGGGGCCAACTCGTCACCCTGATCCA
ATTCTTCATCTTGGACTAACTCATCACCTTGGGCTGCCTCATCATTGGGAGCAACCTCATTATCTTGGGTCATCTGAGTGTCGTTGGCAATTTCGTCAGC
CATGCTGATAGGCTAGCGGCTGAACTCGTGAAAGCTG