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Detailed information on CNT30580031


BLAST search results

BLAST vs Swiss-Prot:
sp|P93604|LRK10_WHEAT, E-value = 5e-26

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690663Echinochloa crusgalliOryza sativa22.1510.8487.31134forward

Expression of CNT30580031

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MLITSFTKSSPCPWIWCLYCWKMYSNFALSPWAFD*

>peptide 2 (32 aa)
MYLSKEPLSMYSYIKARFEPSKQKANKLTVLT*

>peptide 3 (39 aa)
MRGLANAHNFIHKIFSLSMDLVLILLENVFQFCIESVGI*

Sequence

>CNT30580031
CTTGATATCAAAATGGACAATGCGTGTATTACAACTATGGTGCAAGTATTCTAACCCTCGAGCAATCCCAATTGCTATTGTATAGATCTTGTCCCATCCT
AAAACTGCTTTAGGATTCTGTAAGTAGATGTACCTATCCAAAGAGCCATTGAGCATGTACTCATATATTAAGGCTCGTTTCGAGCCCTCCAAACAAAAAG
CAAATAAGCTAACAGTATTAACATGAGAGGTCTTGCCAATGCTCATAACTTCATTCACAAAATCTTCTCCTTGTCCATGGATTTGGTGCTTATATTGTTG
GAAAATGTATTCCAATTTTGCATTGAGTCCGTGGGCATTTGATTAGGTGGAAATTGGGTTTACTTGGAGTCTTGGACAGCTTTTGAAATGTGGGTGTCAA
CTGTCAACCTTAAGATTAACTTTTGGTATGAACCTGAAGATTAACTGAGAAAGCTTCAGATTCAATGATATTTAGAACCTAACTCAAGTAGTCAACAAAA
GTTATATCCCTTTCGGCCATAGTTGTACATGTCTTGTGAGTCATGGCAACGATCAGCCTCATTCTCGTATTTCAACATGCCATTAATCCAGGACCCAACT
ATATG